Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC7.22□□□□□ -1.25
RIPK4P57078 AC084824.2-201ENST00000548906 345 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC7.22□□□□□ -1.25
RIPK4P57078 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.22□□□□□ -1.25
RIPK4P57078 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.22□□□□□ -1.25
RIPK4P57078 AC025857.2-201ENST00000602711 238 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.22□□□□□ -1.25
RIPK4P57078 AC015712.7-201ENST00000615211 635 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 NEK3-211ENST00000629912 141 ntTSL 5 BASIC7.22□□□□□ -1.25
RIPK4P57078 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RIPK4P57078 DNM1P47-203ENST00000571780 12667 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RIPK4P57078 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
RIPK4P57078 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RIPK4P57078 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
RIPK4P57078 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
RIPK4P57078 AC006206.1-201ENST00000544842 3387 ntBASIC7.22□□□□□ -1.25
RIPK4P57078 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC7.22□□□□□ -1.25
RIPK4P57078 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.22□□□□□ -1.25
RIPK4P57078 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
RIPK4P57078 AC016745.2-201ENST00000608834 3443 ntBASIC7.21□□□□□ -1.25
RIPK4P57078 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC7.21□□□□□ -1.26
RIPK4P57078 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.21□□□□□ -1.26
RIPK4P57078 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
RIPK4P57078 RNU1-77P-201ENST00000390868 162 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.21□□□□□ -1.26
RIPK4P57078 RIMKLBP2-201ENST00000424737 654 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC7.21□□□□□ -1.26
RIPK4P57078 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC7.21□□□□□ -1.26
RIPK4P57078 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC7.21□□□□□ -1.26
RIPK4P57078 SPRYD7P1-201ENST00000443861 570 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AC073072.2-201ENST00000447425 348 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC7.21□□□□□ -1.26
RIPK4P57078 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC7.21□□□□□ -1.26
RIPK4P57078 UBA52P7-201ENST00000486088 380 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.21□□□□□ -1.26
RIPK4P57078 LDHC-203ENST00000535809 757 ntTSL 5 BASIC7.21□□□□□ -1.26
RIPK4P57078 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.21□□□□□ -1.26
RIPK4P57078 BLZF2P-201ENST00000553776 1130 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.21□□□□□ -1.26
RIPK4P57078 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC7.21□□□□□ -1.26
RIPK4P57078 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.21□□□□□ -1.26
RIPK4P57078 AC125494.2-201ENST00000602431 657 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AC009237.13-201ENST00000603193 276 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 AP000894.4-201ENST00000610185 483 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 RNA5SP439-201ENST00000617595 124 ntBASIC7.21□□□□□ -1.26
RIPK4P57078 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.21□□□□□ -1.26
RIPK4P57078 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
RIPK4P57078 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.21□□□□□ -1.26
RIPK4P57078 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 AC009804.1-201ENST00000400949 179 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 RPL35AP24-201ENST00000413846 330 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.2□□□□□ -1.26
RIPK4P57078 AL354868.1-201ENST00000417077 482 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 AC009506.2-201ENST00000420635 840 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 AC105399.1-202ENST00000447303 205 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 RPL7P45-201ENST00000455851 743 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 AC011225.1-201ENST00000457751 369 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 SNORA70.11-201ENST00000515987 138 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 SNORA70.13-201ENST00000516116 138 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC7.2□□□□□ -1.26
RIPK4P57078 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 AC007225.2-201ENST00000562529 256 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 FKBP1AP1-201ENST00000594588 318 ntBASIC7.2□□□□□ -1.26
RIPK4P57078 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.2□□□□□ -1.26
RIPK4P57078 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
RIPK4P57078 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
RIPK4P57078 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
RIPK4P57078 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
RIPK4P57078 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC7.19□□□□□ -1.26
RIPK4P57078 RNA5SP335-201ENST00000363817 110 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
RIPK4P57078 SRSF1P1-201ENST00000424058 520 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 LINC02210-201ENST00000444561 288 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC7.19□□□□□ -1.26
RIPK4P57078 IGBP1P3-201ENST00000447449 1000 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 RPS26P41-201ENST00000450370 284 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC7.19□□□□□ -1.26
RIPK4P57078 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.19□□□□□ -1.26
RIPK4P57078 BX510359.5-201ENST00000515651 304 ntBASIC7.19□□□□□ -1.26
RIPK4P57078 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
RIPK4P57078 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms