Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH12P55289 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH12P55289 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDH12P55289 AC232271.1-201ENST00000602455 2715 ntBASIC5.45□□□□□ -1.54
CDH12P55289 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDH12P55289 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
CDH12P55289 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH12P55289 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDH12P55289 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 PPBPP2-201ENST00000513150 1362 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 AL034417.1-201ENST00000399343 800 ntBASIC5.44□□□□□ -1.54
CDH12P55289 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH12P55289 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 OR5W1P-201ENST00000423705 938 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 TRIM60P16-201ENST00000444048 694 ntBASIC5.44□□□□□ -1.54
CDH12P55289 CR383656.1-201ENST00000484916 377 ntBASIC5.44□□□□□ -1.54
CDH12P55289 OR9N1P-202ENST00000494289 481 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC106822.1-201ENST00000502647 526 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC108103.1-201ENST00000511286 446 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 RNU6-334P-201ENST00000517072 102 ntBASIC5.44□□□□□ -1.54
CDH12P55289 IGKV2-4-201ENST00000523070 340 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.44□□□□□ -1.54
CDH12P55289 AL121594.2-201ENST00000541658 472 ntBASIC5.44□□□□□ -1.54
CDH12P55289 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.44□□□□□ -1.54
CDH12P55289 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 AC233266.2-201ENST00000567067 528 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.44□□□□□ -1.54
CDH12P55289 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 AC005479.3-201ENST00000602790 431 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC073333.2-201ENST00000603589 769 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC005156.1-201ENST00000613371 573 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AL445670.1-201ENST00000618889 801 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC096708.4-201ENST00000620563 552 ntBASIC5.44□□□□□ -1.54
CDH12P55289 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CDH12P55289 AC022400.9-201ENST00000623633 273 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AC010608.3-201ENST00000625048 527 ntBASIC5.44□□□□□ -1.54
CDH12P55289 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 AC073488.6-201ENST00000632293 754 ntBASIC5.44□□□□□ -1.54
CDH12P55289 OR4G3P-201ENST00000633500 913 ntBASIC5.44□□□□□ -1.54
CDH12P55289 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.44□□□□□ -1.54
CDH12P55289 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDH12P55289 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDH12P55289 MTCO1P28-201ENST00000574177 1528 ntBASIC5.43□□□□□ -1.54
CDH12P55289 RBMY1HP-201ENST00000382759 1389 ntBASIC5.43□□□□□ -1.54
CDH12P55289 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.43□□□□□ -1.54
CDH12P55289 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 YWHAZP6-201ENST00000399764 738 ntBASIC5.43□□□□□ -1.54
CDH12P55289 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 ARL2BPP3-201ENST00000421226 480 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 AC108479.1-201ENST00000431142 427 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 AC023141.3-201ENST00000436698 278 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC096775.1-201ENST00000437724 448 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC006326.1-201ENST00000445465 787 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC007383.1-201ENST00000445875 636 ntBASIC5.43□□□□□ -1.54
CDH12P55289 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CDH12P55289 PPIAP7-201ENST00000454070 489 ntBASIC5.43□□□□□ -1.54
CDH12P55289 STRADBP1-201ENST00000478954 1281 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC006539.1-201ENST00000481419 501 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 RPEP1-201ENST00000504507 658 ntBASIC5.43□□□□□ -1.54
CDH12P55289 NAMPTP2-201ENST00000505629 1115 ntBASIC5.43□□□□□ -1.54
CDH12P55289 OR7E99P-201ENST00000505750 922 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.43□□□□□ -1.54
CDH12P55289 MAST4-IT1-201ENST00000514241 658 ntBASIC5.43□□□□□ -1.54
CDH12P55289 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.43□□□□□ -1.54
CDH12P55289 HMGB1P46-201ENST00000520062 610 ntBASIC5.43□□□□□ -1.54
CDH12P55289 AP000620.1-201ENST00000527147 504 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms