Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 U3.2-201ENST00000362981 210 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 RNU6-40P-201ENST00000384254 107 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC073464.3-201ENST00000422564 712 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 AL121882.1-201ENST00000422893 417 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 ZNF965P-201ENST00000432501 817 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 SDR42E1P3-201ENST00000438345 502 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 Z99127.2-201ENST00000441426 334 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 BX284632.1-201ENST00000478218 541 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 AC073610.1-201ENST00000489971 396 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 SUMO2P4-201ENST00000504193 276 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC093770.1-201ENST00000511559 571 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC112206.4-201ENST00000515142 405 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC093510.2-201ENST00000562820 896 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AP004372.1-201ENST00000604842 844 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 AC019080.5-201ENST00000624891 757 ntBASIC6.64□□□□□ -1.35
TM4SF4P48230 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
TM4SF4P48230 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.64□□□□□ -1.35
TM4SF4P48230 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TM4SF4P48230 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF4P48230 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
TM4SF4P48230 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 FBXL21-201ENST00000297158 1305 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF4P48230 RPL26P29-201ENST00000415623 438 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 NENFP1-201ENST00000419476 466 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 AL049745.1-201ENST00000433953 286 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 AL663074.2-201ENST00000440621 479 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AL513321.1-201ENST00000441175 761 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AL389915.2-201ENST00000454576 441 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AL035090.1-201ENST00000454835 332 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AC103563.5-201ENST00000455643 364 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 MTND2P39-201ENST00000457230 764 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 CABYRP1-201ENST00000465493 1045 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AC006463.2-201ENST00000473326 348 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF4P48230 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC074255.1-201ENST00000511259 501 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AL671862.1-201ENST00000515851 349 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF4P48230 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TM4SF4P48230 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC011840.5-201ENST00000582125 771 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF4P48230 AC011503.2-201ENST00000594230 1500 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC6.63□□□□□ -1.35
TM4SF4P48230 BMS1P7-201ENST00000602440 1052 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AL355802.4-201ENST00000607635 548 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 AC000068.2-201ENST00000608816 460 ntBASIC6.63□□□□□ -1.35
TM4SF4P48230 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.63□□□□□ -1.35
TM4SF4P48230 CR589904.2-201ENST00000612533 440 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms