Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 MIR4489-201ENST00000578869 62 ntBASIC6.45□□□□□ -1.38
NEDD4P46934 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
NEDD4P46934 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.45□□□□□ -1.38
NEDD4P46934 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.45□□□□□ -1.38
NEDD4P46934 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
NEDD4P46934 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6.44□□□□□ -1.38
NEDD4P46934 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.44□□□□□ -1.38
NEDD4P46934 AC137056.2-201ENST00000624055 1958 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.44□□□□□ -1.38
NEDD4P46934 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
NEDD4P46934 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.44□□□□□ -1.38
NEDD4P46934 RN7SL188P-201ENST00000469842 285 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 SIAH1P1-201ENST00000479411 923 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 EIF3LP3-201ENST00000495197 822 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 AC091912.1-201ENST00000511351 248 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.44□□□□□ -1.38
NEDD4P46934 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.44□□□□□ -1.38
NEDD4P46934 RPL7L1P4-201ENST00000513004 707 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 OR4A17P-201ENST00000526032 904 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 OR8G3P-201ENST00000533406 921 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 AP004607.2-201ENST00000533949 322 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 NPM1P5-201ENST00000557228 838 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.44□□□□□ -1.38
NEDD4P46934 RN7SL753P-201ENST00000581238 290 ntBASIC6.44□□□□□ -1.38
NEDD4P46934 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC6.44□□□□□ -1.38
NEDD4P46934 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.44□□□□□ -1.38
NEDD4P46934 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.44□□□□□ -1.38
NEDD4P46934 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
NEDD4P46934 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
NEDD4P46934 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.44□□□□□ -1.38
NEDD4P46934 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
NEDD4P46934 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 AC079097.1-201ENST00000512187 1399 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.43□□□□□ -1.38
NEDD4P46934 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC007938.2-201ENST00000604666 2634 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
NEDD4P46934 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.43□□□□□ -1.38
NEDD4P46934 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 RN7SKP162-201ENST00000363605 345 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AL133388.1-201ENST00000404509 287 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 CFL1P1-202ENST00000432948 411 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 GSTM5P1-201ENST00000434751 660 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC073465.2-201ENST00000440938 498 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AC105399.1-202ENST00000447303 205 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 USP9YP2-201ENST00000504503 1000 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC109464.1-201ENST00000511091 819 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.43□□□□□ -1.38
NEDD4P46934 USP9YP1-201ENST00000513521 1002 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 IGKV2-18-201ENST00000522607 343 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.43□□□□□ -1.38
NEDD4P46934 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.43□□□□□ -1.38
NEDD4P46934 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.43□□□□□ -1.38
NEDD4P46934 IMMP1LP3-201ENST00000604197 224 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AL137246.1-201ENST00000607072 977 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AL512624.1-201ENST00000613638 469 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 AC136428.4-201ENST00000634254 1155 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
NEDD4P46934 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
NEDD4P46934 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
NEDD4P46934 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
NEDD4P46934 AC100757.1-201ENST00000616872 1835 ntBASIC6.43□□□□□ -1.38
NEDD4P46934 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 1330.3 ms