Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6□□□□□ -1.45
PTPN9P43378 MEMO1P4-201ENST00000453590 386 ntBASIC6□□□□□ -1.45
PTPN9P43378 AC016687.1-201ENST00000482574 353 ntBASIC6□□□□□ -1.45
PTPN9P43378 AC073610.1-201ENST00000489971 396 ntBASIC6□□□□□ -1.45
PTPN9P43378 AC009120.1-201ENST00000493458 473 ntBASIC6□□□□□ -1.45
PTPN9P43378 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6□□□□□ -1.45
PTPN9P43378 NENFP3-201ENST00000503735 313 ntBASIC6□□□□□ -1.45
PTPN9P43378 MTND3P24-201ENST00000506306 329 ntBASIC6□□□□□ -1.45
PTPN9P43378 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6□□□□□ -1.45
PTPN9P43378 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6□□□□□ -1.45
PTPN9P43378 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6□□□□□ -1.45
PTPN9P43378 NPM1P5-201ENST00000557228 838 ntBASIC6□□□□□ -1.45
PTPN9P43378 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 AC009962.1-201ENST00000567327 3813 ntBASIC6□□□□□ -1.45
PTPN9P43378 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6□□□□□ -1.45
PTPN9P43378 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6□□□□□ -1.45
PTPN9P43378 AP001357.1-201ENST00000586304 1053 ntBASIC6□□□□□ -1.45
PTPN9P43378 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN9P43378 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN9P43378 AC073111.2-201ENST00000605657 1075 ntBASIC6□□□□□ -1.45
PTPN9P43378 AL035661.1-201ENST00000620459 1144 ntBASIC6□□□□□ -1.45
PTPN9P43378 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTPN9P43378 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
PTPN9P43378 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN9P43378 AL359955.1-201ENST00000455242 3275 ntBASIC6□□□□□ -1.45
PTPN9P43378 CNOT6LP1-201ENST00000559681 1462 ntBASIC6□□□□□ -1.45
PTPN9P43378 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
PTPN9P43378 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6□□□□□ -1.45
PTPN9P43378 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
PTPN9P43378 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTPN9P43378 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6□□□□□ -1.45
PTPN9P43378 WDR95P-201ENST00000425638 1542 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC068446.1-201ENST00000556425 1549 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PTPN9P43378 ICE2P1-201ENST00000512800 1849 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN9P43378 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PTPN9P43378 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PTPN9P43378 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 AC120036.2-201ENST00000509729 1474 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AL159987.1-201ENST00000347911 293 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 RNU4-39P-201ENST00000362455 127 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AMZ2P2-201ENST00000406819 1057 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 AC115283.1-201ENST00000427353 400 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 RAB9AP5-201ENST00000437794 597 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 RAB9AP2-201ENST00000443911 597 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 CYCSP53-201ENST00000455540 265 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 RPS23P2-201ENST00000463671 415 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC011476.1-201ENST00000466725 307 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 SCARNA6.1-201ENST00000516989 238 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC021678.3-201ENST00000517893 476 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 AC019227.1-201ENST00000526902 510 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN9P43378 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.99□□□□□ -1.45
PTPN9P43378 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN9P43378 MTND2P13-201ENST00000577438 1039 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.99□□□□□ -1.45
PTPN9P43378 AC006249.1-201ENST00000621223 471 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 AC140134.1-201ENST00000511830 3544 ntBASIC5.99□□□□□ -1.45
PTPN9P43378 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.99□□□□□ -1.45
PTPN9P43378 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.99□□□□□ -1.45
PTPN9P43378 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PTPN9P43378 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PTPN9P43378 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.98□□□□□ -1.45
PTPN9P43378 AL512283.1-201ENST00000606756 1384 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTPN9P43378 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PTPN9P43378 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC5.98□□□□□ -1.45
PTPN9P43378 RPS3AP2-201ENST00000407190 754 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 RN7SKP17-201ENST00000411242 351 ntBASIC5.98□□□□□ -1.45
PTPN9P43378 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.98□□□□□ -1.45
PTPN9P43378 AC098592.2-201ENST00000413158 265 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms