Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.11□□□□□ -1.27
COL15A1P39059 RN7SKP99-201ENST00000517028 307 ntBASIC7.11□□□□□ -1.27
COL15A1P39059 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.11□□□□□ -1.27
COL15A1P39059 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC7.11□□□□□ -1.27
COL15A1P39059 AC067805.1-201ENST00000559344 470 ntBASIC7.11□□□□□ -1.27
COL15A1P39059 AP003789.1-201ENST00000617737 605 ntBASIC7.11□□□□□ -1.27
COL15A1P39059 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL15A1P39059 AP000720.1-201ENST00000625091 483 ntBASIC7.11□□□□□ -1.27
COL15A1P39059 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.11□□□□□ -1.27
COL15A1P39059 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.11□□□□□ -1.27
COL15A1P39059 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
COL15A1P39059 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
COL15A1P39059 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC7.11□□□□□ -1.27
COL15A1P39059 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC7.11□□□□□ -1.27
COL15A1P39059 AC092070.2-203ENST00000598377 3644 ntBASIC7.11□□□□□ -1.27
COL15A1P39059 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
COL15A1P39059 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
COL15A1P39059 AL645733.1-201ENST00000402250 217 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 AL589647.1-201ENST00000402485 466 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.1□□□□□ -1.27
COL15A1P39059 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.1□□□□□ -1.27
COL15A1P39059 NPM1P42-201ENST00000560329 862 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 RBM22P1-201ENST00000578589 1214 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.1□□□□□ -1.27
COL15A1P39059 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC7.1□□□□□ -1.27
COL15A1P39059 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC7.1□□□□□ -1.27
COL15A1P39059 AL391597.1-201ENST00000618707 694 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 RFC1-217ENST00000639695 867 ntTSL 5 BASIC7.1□□□□□ -1.27
COL15A1P39059 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC7.1□□□□□ -1.27
COL15A1P39059 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.1□□□□□ -1.27
COL15A1P39059 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.1□□□□□ -1.27
COL15A1P39059 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
COL15A1P39059 AC023421.1-201ENST00000590535 1785 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
COL15A1P39059 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
COL15A1P39059 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 AC007114.2-201ENST00000576014 4281 ntBASIC7.1□□□□□ -1.27
COL15A1P39059 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
COL15A1P39059 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
COL15A1P39059 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 AC019070.1-201ENST00000415008 1024 ntBASIC7.09□□□□□ -1.27
COL15A1P39059 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.09□□□□□ -1.27
COL15A1P39059 RANP7-201ENST00000418085 644 ntBASIC7.09□□□□□ -1.27
COL15A1P39059 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.09□□□□□ -1.27
COL15A1P39059 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC7.09□□□□□ -1.27
COL15A1P39059 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.09□□□□□ -1.27
COL15A1P39059 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC7.09□□□□□ -1.27
COL15A1P39059 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.09□□□□□ -1.27
COL15A1P39059 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.09□□□□□ -1.27
COL15A1P39059 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 AC023389.2-201ENST00000580031 955 ntBASIC7.09□□□□□ -1.27
COL15A1P39059 AL158152.1-201ENST00000602652 1435 ntBASIC7.09□□□□□ -1.27
COL15A1P39059 HIRAP1-201ENST00000605318 787 ntBASIC7.09□□□□□ -1.27
COL15A1P39059 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL15A1P39059 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
COL15A1P39059 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
COL15A1P39059 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
COL15A1P39059 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
COL15A1P39059 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC7.09□□□□□ -1.27
COL15A1P39059 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC7.09□□□□□ -1.28
COL15A1P39059 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC7.09□□□□□ -1.28
COL15A1P39059 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 AC083799.1-201ENST00000366451 910 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
COL15A1P39059 AL109941.1-201ENST00000401925 229 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.08□□□□□ -1.28
COL15A1P39059 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.08□□□□□ -1.28
COL15A1P39059 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC7.08□□□□□ -1.28
COL15A1P39059 TRIM60P13-201ENST00000432350 1283 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 RSL24D1P8-201ENST00000434442 492 ntBASIC7.08□□□□□ -1.28
COL15A1P39059 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC7.08□□□□□ -1.28
COL15A1P39059 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC7.08□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms