Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MSL3P1-202ENST00000440028 1468 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 AL121886.1-201ENST00000358609 435 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 RN7SKP15-201ENST00000364742 309 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 RN7SKP17-201ENST00000411242 351 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD13P35453 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HOXD13P35453 NANOGP9-201ENST00000439890 892 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC005297.1-201ENST00000444765 862 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD13P35453 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 AC105918.1-201ENST00000474399 838 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 OR7E157P-201ENST00000494376 911 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 AK4P6-201ENST00000505168 528 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD13P35453 RNU6-615P-201ENST00000516065 106 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 RN7SKP34-201ENST00000516142 244 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 SNORA43.3-201ENST00000517240 103 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD13P35453 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD13P35453 NDUFA5P11-201ENST00000567995 343 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD13P35453 MIR4311-201ENST00000580794 100 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.18□□□□□ -1.42
HOXD13P35453 AC025574.2-201ENST00000615621 514 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC090607.5-201ENST00000615692 224 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.18□□□□□ -1.42
HOXD13P35453 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 AC015689.2-201ENST00000528172 1738 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HOXD13P35453 SAMM50P1-201ENST00000455403 1399 ntBASIC6.18□□□□□ -1.42
HOXD13P35453 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.18□□□□□ -1.42
HOXD13P35453 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD13P35453 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 AC010329.1-201ENST00000593903 8328 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 AC114774.1-201ENST00000507410 1770 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD13P35453 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.17□□□□□ -1.42
HOXD13P35453 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD13P35453 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD13P35453 AC007161.1-204ENST00000423039 460 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 NPM1P26-201ENST00000426339 738 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 RPL23AP19-201ENST00000436229 369 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 AP000547.1-201ENST00000454360 617 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 SNORD125-201ENST00000459538 96 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD13P35453 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD13P35453 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD13P35453 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.17□□□□□ -1.42
HOXD13P35453 TRIM51DP-201ENST00000529746 596 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.17□□□□□ -1.42
HOXD13P35453 AP000619.2-201ENST00000546014 969 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 DUX4L52-201ENST00000549363 777 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 AC012467.1-201ENST00000607740 256 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.17□□□□□ -1.42
HOXD13P35453 AC079776.5-201ENST00000641920 211 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HOXD13P35453 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HOXD13P35453 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.17□□□□□ -1.42
HOXD13P35453 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.17□□□□□ -1.42
HOXD13P35453 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD13P35453 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 NLRP3P1-201ENST00000622303 1785 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 LINC02019-201ENST00000608605 2060 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HOXD13P35453 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HOXD13P35453 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HOXD13P35453 OOSP1-201ENST00000398992 1270 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD13P35453 RPSAP35-201ENST00000413753 818 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 EEF1B2P8-201ENST00000414101 671 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AL596448.1-201ENST00000415024 392 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 RNF10P1-201ENST00000418589 369 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 OR10T1P-201ENST00000424327 947 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD13P35453 BX119321.1-201ENST00000428912 797 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HOXD13P35453 RPS29P14-201ENST00000431518 171 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.16□□□□□ -1.42
HOXD13P35453 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.16□□□□□ -1.42
HOXD13P35453 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.16□□□□□ -1.42
HOXD13P35453 STRADBP1-201ENST00000478954 1281 ntBASIC6.16□□□□□ -1.42
HOXD13P35453 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 140.4 ms