Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA13P31271 TMEM183AP1-205ENST00000432739 290 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 BX679664.2-201ENST00000439282 283 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 NANOGP9-201ENST00000439890 892 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 AL596266.1-201ENST00000448132 400 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 TRBV8-1-201ENST00000481590 279 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 RPS4XP1-201ENST00000482189 787 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 MTND3P6-201ENST00000485242 339 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXA13P31271 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXA13P31271 AL049874.4-201ENST00000557593 255 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 AC093524.1-201ENST00000564266 1094 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA13P31271 MIR1269B-201ENST00000580405 75 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 IMMP1LP3-201ENST00000604197 224 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 AC000068.2-201ENST00000608816 460 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 AL391597.1-201ENST00000618707 694 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA13P31271 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
HOXA13P31271 MT-RNR2-201ENST00000387347 1559 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 AL034546.1-201ENST00000623740 3693 ntBASIC6.34□□□□□ -1.39
HOXA13P31271 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
HOXA13P31271 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.34□□□□□ -1.4
HOXA13P31271 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.34□□□□□ -1.4
HOXA13P31271 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
HOXA13P31271 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
HOXA13P31271 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.33□□□□□ -1.4
HOXA13P31271 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXA13P31271 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA13P31271 AC235565.1-201ENST00000456962 1325 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA13P31271 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA13P31271 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HOXA13P31271 RN7SKP279-201ENST00000411383 298 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 RNGTTP1-201ENST00000420965 728 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 AC007161.1-204ENST00000423039 460 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 CYCSP6-201ENST00000434498 302 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 AC092106.1-201ENST00000444291 373 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA13P31271 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA13P31271 AC130364.2-201ENST00000528639 604 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 PMS2P3-207ENST00000529061 717 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA13P31271 AC078878.1-201ENST00000539832 958 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA13P31271 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.33□□□□□ -1.4
HOXA13P31271 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA13P31271 NPM1P45-201ENST00000583151 559 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.33□□□□□ -1.4
HOXA13P31271 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.33□□□□□ -1.4
HOXA13P31271 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA13P31271 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.33□□□□□ -1.4
HOXA13P31271 CR788268.1-201ENST00000603931 1809 ntBASIC6.33□□□□□ -1.4
HOXA13P31271 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
HOXA13P31271 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXA13P31271 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
HOXA13P31271 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
HOXA13P31271 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
HOXA13P31271 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA13P31271 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA13P31271 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA13P31271 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA13P31271 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA13P31271 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA13P31271 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
HOXA13P31271 OR9K1P-201ENST00000326513 941 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA13P31271 AL121886.1-201ENST00000358609 435 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 MIR551A-201ENST00000385042 96 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 RNU6-316P-201ENST00000391027 107 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA13P31271 RSL24D1P2-201ENST00000445584 366 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 RPS26P41-201ENST00000450370 284 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA13P31271 AC135999.1-201ENST00000478962 479 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 DEFB109A-201ENST00000482450 265 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 PDCL3P4-201ENST00000489621 720 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA13P31271 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA13P31271 OR5D2P-201ENST00000524390 911 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.32□□□□□ -1.4
HOXA13P31271 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
HOXA13P31271 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA13P31271 AP005403.1-201ENST00000579720 229 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA13P31271 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA13P31271 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.32□□□□□ -1.4
HOXA13P31271 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA13P31271 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.32□□□□□ -1.4
HOXA13P31271 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.32□□□□□ -1.4
HOXA13P31271 AC096586.2-201ENST00000610260 441 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 MTCO1P1-201ENST00000624263 1081 ntBASIC6.32□□□□□ -1.4
HOXA13P31271 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
HOXA13P31271 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms