Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC8.64□□□□□ -1.03
CLIP1P30622 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
CLIP1P30622 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
CLIP1P30622 AL359715.3-201ENST00000569267 2123 ntBASIC8.64□□□□□ -1.03
CLIP1P30622 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.64□□□□□ -1.03
CLIP1P30622 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC8.63□□□□□ -1.03
CLIP1P30622 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC8.63□□□□□ -1.03
CLIP1P30622 RPL23P2-201ENST00000320371 421 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 MIR550A3-201ENST00000390735 95 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AL589647.1-201ENST00000402485 466 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC8.63□□□□□ -1.03
CLIP1P30622 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC8.63□□□□□ -1.03
CLIP1P30622 RPL12P17-201ENST00000432393 498 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.63□□□□□ -1.03
CLIP1P30622 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.63□□□□□ -1.03
CLIP1P30622 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC8.63□□□□□ -1.03
CLIP1P30622 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC8.63□□□□□ -1.03
CLIP1P30622 AC091912.1-201ENST00000511351 248 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 RNA5SP373-201ENST00000517271 95 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC8.63□□□□□ -1.03
CLIP1P30622 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC8.63□□□□□ -1.03
CLIP1P30622 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC8.63□□□□□ -1.03
CLIP1P30622 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
CLIP1P30622 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 AL078621.3-201ENST00000623707 2042 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AC006600.2-201ENST00000624834 2506 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 AC100757.1-201ENST00000616872 1835 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 AL645733.1-201ENST00000402250 217 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC8.63□□□□□ -1.03
CLIP1P30622 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CLIP1P30622 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC8.63□□□□□ -1.03
CLIP1P30622 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.63□□□□□ -1.03
CLIP1P30622 EIF4A2P5-201ENST00000529914 499 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC8.63□□□□□ -1.03
CLIP1P30622 MIR3691-201ENST00000578066 90 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 AC087763.1-201ENST00000603391 286 ntBASIC8.63□□□□□ -1.03
CLIP1P30622 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLIP1P30622 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 AC138907.8-201ENST00000623981 2256 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.62□□□□□ -1.03
CLIP1P30622 AC104964.3-201ENST00000606115 2860 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLIP1P30622 SNORA67-201ENST00000384423 137 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 RN7SKP216-201ENST00000411050 312 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 AL451063.1-201ENST00000450164 1133 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 AC104634.1-201ENST00000452720 462 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 RPL35AP28-201ENST00000459730 331 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC8.62□□□□□ -1.03
CLIP1P30622 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.62□□□□□ -1.03
CLIP1P30622 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC8.62□□□□□ -1.03
CLIP1P30622 IGLCOR22-2-201ENST00000605398 313 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 AL049539.1-201ENST00000611964 459 ntBASIC8.62□□□□□ -1.03
CLIP1P30622 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLIP1P30622 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CLIP1P30622 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.62□□□□□ -1.03
CLIP1P30622 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLIP1P30622 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLIP1P30622 AL355834.1-201ENST00000556602 3965 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLIP1P30622 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLIP1P30622 SELE-204ENST00000367776 3576 ntTSL 5 BASIC8.61□□□□□ -1.03
CLIP1P30622 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.61□□□□□ -1.03
CLIP1P30622 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CLIP1P30622 Z82209.2-201ENST00000623410 2012 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC8.61□□□□□ -1.03
CLIP1P30622 FAM96AP1-201ENST00000430879 482 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC8.61□□□□□ -1.03
CLIP1P30622 VN1R54P-201ENST00000435210 1049 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 RPL7P61-201ENST00000451721 751 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 AL389915.2-201ENST00000454576 441 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CLIP1P30622 AC018558.5-201ENST00000565840 952 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC8.61□□□□□ -1.03
CLIP1P30622 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC8.61□□□□□ -1.03
CLIP1P30622 AC090510.2-201ENST00000617465 629 ntBASIC8.61□□□□□ -1.03
CLIP1P30622 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC8.61□□□□□ -1.03
CLIP1P30622 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CLIP1P30622 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.6□□□□□ -1.03
CLIP1P30622 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC8.6□□□□□ -1.03
CLIP1P30622 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC8.6□□□□□ -1.03
CLIP1P30622 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC8.6□□□□□ -1.03
CLIP1P30622 AC079777.1-201ENST00000623836 1953 ntBASIC8.6□□□□□ -1.03
CLIP1P30622 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC8.6□□□□□ -1.03
CLIP1P30622 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC8.6□□□□□ -1.03
CLIP1P30622 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
CLIP1P30622 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
CLIP1P30622 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.6 ms