Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
TM4SF1P30408 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.84□□□□□ -1.31
TM4SF1P30408 RNF10P1-201ENST00000418589 369 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.84□□□□□ -1.31
TM4SF1P30408 CRIP1P1-201ENST00000427567 185 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.84□□□□□ -1.31
TM4SF1P30408 GSTA7P-201ENST00000438425 448 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AL672138.1-201ENST00000450604 1015 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
TM4SF1P30408 AC009127.1-201ENST00000467090 155 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AC090589.1-201ENST00000473109 362 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AC112184.1-201ENST00000505179 312 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 MTND6P2-201ENST00000512226 524 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 RN7SKP253-201ENST00000516424 309 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC6.84□□□□□ -1.31
TM4SF1P30408 AC084033.1-201ENST00000550830 633 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.84□□□□□ -1.31
TM4SF1P30408 AC012557.1-201ENST00000607115 611 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AP005212.4-201ENST00000614206 710 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AC002044.3-201ENST00000623314 541 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AC099494.2-201ENST00000623371 978 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 AP003400.2-201ENST00000624036 666 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC6.84□□□□□ -1.31
TM4SF1P30408 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.84□□□□□ -1.31
TM4SF1P30408 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.84□□□□□ -1.31
TM4SF1P30408 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.84□□□□□ -1.31
TM4SF1P30408 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 INTS6P1-201ENST00000504674 2530 ntBASIC6.84□□□□□ -1.31
TM4SF1P30408 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
TM4SF1P30408 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
TM4SF1P30408 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.32
TM4SF1P30408 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
TM4SF1P30408 AC010168.2-201ENST00000562691 5428 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
TM4SF1P30408 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.83□□□□□ -1.32
TM4SF1P30408 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 USP9YP9-201ENST00000429406 715 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 NANOGP9-201ENST00000439890 892 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 GAPDHP25-201ENST00000447061 1001 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.83□□□□□ -1.32
TM4SF1P30408 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.83□□□□□ -1.32
TM4SF1P30408 AC092647.2-201ENST00000452998 253 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 MEMO1P4-201ENST00000453590 386 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 SLC25A51P1-201ENST00000468432 871 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 AC079080.1-201ENST00000479841 822 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 AL133372.1-201ENST00000493565 745 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.83□□□□□ -1.32
TM4SF1P30408 AC023818.1-201ENST00000498379 384 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.83□□□□□ -1.32
TM4SF1P30408 AC004980.4-201ENST00000513375 203 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 AP004607.2-201ENST00000533949 322 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
TM4SF1P30408 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.83□□□□□ -1.32
TM4SF1P30408 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.83□□□□□ -1.32
TM4SF1P30408 AL022394.1-201ENST00000606979 292 ntBASIC6.83□□□□□ -1.32
TM4SF1P30408 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.83□□□□□ -1.32
TM4SF1P30408 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TM4SF1P30408 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
TM4SF1P30408 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.83□□□□□ -1.32
TM4SF1P30408 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TM4SF1P30408 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TM4SF1P30408 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
TM4SF1P30408 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.82□□□□□ -1.32
TM4SF1P30408 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.82□□□□□ -1.32
TM4SF1P30408 AC022164.1-201ENST00000568767 2673 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TM4SF1P30408 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.82□□□□□ -1.32
TM4SF1P30408 RNA5SP487-201ENST00000410186 122 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 AC096921.1-201ENST00000411661 375 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.82□□□□□ -1.32
TM4SF1P30408 USP24P1-201ENST00000433802 779 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 AC073648.4-201ENST00000442655 781 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.82□□□□□ -1.32
TM4SF1P30408 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.82□□□□□ -1.32
TM4SF1P30408 AC024940.3-201ENST00000538551 316 ntBASIC6.82□□□□□ -1.32
TM4SF1P30408 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC6.82□□□□□ -1.32
TM4SF1P30408 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms