Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.77□□□□□ -1.33
COL8A1P27658 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC6.77□□□□□ -1.33
COL8A1P27658 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.77□□□□□ -1.33
COL8A1P27658 MIR6885-201ENST00000612241 66 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 C2orf27A-204ENST00000623058 969 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 AC012557.3-201ENST00000626439 255 ntBASIC6.77□□□□□ -1.33
COL8A1P27658 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 FSD1L-202ENST00000374710 7664 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 AL357055.3-201ENST00000421157 2459 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 MPEG1-201ENST00000361050 4442 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
COL8A1P27658 ARMC3-201ENST00000298032 2811 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC6.77□□□□□ -1.33
COL8A1P27658 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
COL8A1P27658 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 MKL2-205ENST00000572567 2185 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 KIF6-208ENST00000538893 2386 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC073055.1-201ENST00000456901 1621 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 PGRMC2-202ENST00000394276 2858 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC008937.3-201ENST00000606813 1700 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AL121936.1-201ENST00000641660 2884 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 RN7SKP23-201ENST00000625159 4301 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 KAT6B-205ENST00000372725 6944 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 Z97200.1-201ENST00000606154 2045 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 UBQLN3-201ENST00000311659 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL8A1P27658 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL8A1P27658 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
COL8A1P27658 Y_RNA.1-201ENST00000352915 104 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 RNU5E-5P-201ENST00000365379 116 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 Y_RNA.384-201ENST00000383909 102 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC005522.1-201ENST00000395416 346 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 HMGB3P18-201ENST00000406327 590 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 JKAMPP1-201ENST00000413804 919 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC113618.1-201ENST00000416747 285 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC114482.1-201ENST00000418010 247 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC064875.1-203ENST00000422996 582 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
COL8A1P27658 CYP4F34P-201ENST00000425951 481 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 Z82205.1-201ENST00000428456 297 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 HMGB1P45-201ENST00000435986 653 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 UBE2FP3-201ENST00000436366 524 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 GTF2IP13-201ENST00000438487 386 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 ST13P21-201ENST00000453250 1098 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.76□□□□□ -1.33
COL8A1P27658 AL035407.2-201ENST00000454090 378 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 SNORD19B-201ENST00000459623 84 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC018638.3-201ENST00000461273 132 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 RN7SL688P-201ENST00000471754 275 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC022336.1-201ENST00000475510 337 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC068898.2-201ENST00000514425 597 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 RNA5SP473-201ENST00000516402 125 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.76□□□□□ -1.33
COL8A1P27658 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 BRD9P1-201ENST00000529855 560 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 OR4A1P-201ENST00000532342 920 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC6.76□□□□□ -1.33
COL8A1P27658 AL117187.1-201ENST00000555482 181 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.76□□□□□ -1.33
COL8A1P27658 RPL12P25-202ENST00000598100 674 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.76□□□□□ -1.33
COL8A1P27658 AL162413.1-201ENST00000603198 110 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC245014.2-201ENST00000603689 287 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 SUMO2P14-201ENST00000604488 293 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC246785.4-201ENST00000605374 287 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 CTHRC1P1-201ENST00000605383 469 ntBASIC6.76□□□□□ -1.33
COL8A1P27658 AC012640.3-201ENST00000607847 430 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms