Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 SNRPCP2-201ENST00000504370 475 ntBASIC6.36□□□□□ -1.39
HOXC6P09630 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC6P09630 AP003168.1-201ENST00000530091 307 ntBASIC6.36□□□□□ -1.39
HOXC6P09630 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
HOXC6P09630 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC6P09630 MIR4646-201ENST00000580775 63 ntBASIC6.36□□□□□ -1.39
HOXC6P09630 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC6P09630 PCA3_2.1-201ENST00000612507 409 ntBASIC6.36□□□□□ -1.39
HOXC6P09630 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.36□□□□□ -1.39
HOXC6P09630 AP000720.1-201ENST00000625091 483 ntBASIC6.36□□□□□ -1.39
HOXC6P09630 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.36□□□□□ -1.39
HOXC6P09630 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXC6P09630 ZNF658B-201ENST00000602828 3408 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 ABCA11P-202ENST00000504019 2110 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 AC005224.3-201ENST00000584683 2140 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 AC131971.1-201ENST00000332881 1482 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
HOXC6P09630 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 RNU1-106P-201ENST00000384382 164 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC6P09630 RPS6P14-201ENST00000425165 719 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 AL389915.2-201ENST00000454576 441 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC6P09630 BX284632.1-201ENST00000478218 541 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.35□□□□□ -1.39
HOXC6P09630 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 TOMM22P4-201ENST00000511318 336 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 IGLV3-24-201ENST00000517477 197 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 AP000676.2-201ENST00000529711 301 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 SNRPGP1-201ENST00000553864 222 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.35□□□□□ -1.39
HOXC6P09630 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 AL133406.3-201ENST00000606817 541 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 AL162574.2-201ENST00000614618 657 ntBASIC6.35□□□□□ -1.39
HOXC6P09630 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.35□□□□□ -1.39
HOXC6P09630 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HOXC6P09630 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.35□□□□□ -1.39
HOXC6P09630 AL669831.5-218ENST00000591702 1873 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC6P09630 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HOXC6P09630 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC6P09630 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.34□□□□□ -1.39
HOXC6P09630 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HOXC6P09630 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
HOXC6P09630 AL109941.1-201ENST00000401925 229 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXC6P09630 RPL37P18-201ENST00000411602 243 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXC6P09630 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 PRUNEP1-201ENST00000425846 705 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 FABP7P2-201ENST00000429946 379 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.34□□□□□ -1.39
HOXC6P09630 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 AC105399.1-202ENST00000447303 205 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 RPL7P61-201ENST00000451721 751 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 MEMO1P4-201ENST00000453590 386 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 RPL35AP28-201ENST00000459730 331 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 DUTP1-201ENST00000493631 470 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXC6P09630 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC6P09630 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.34□□□□□ -1.39
HOXC6P09630 AGGF1P7-201ENST00000562369 913 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 MIR3691-201ENST00000578066 90 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.34□□□□□ -1.39
HOXC6P09630 AC100814.1-201ENST00000606963 623 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
HOXC6P09630 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC6P09630 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.34□□□□□ -1.39
HOXC6P09630 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
HOXC6P09630 AP000641.1-201ENST00000531988 1639 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 AC005225.5-201ENST00000623547 2225 ntBASIC6.34□□□□□ -1.39
HOXC6P09630 ZNF101P1-201ENST00000435701 1720 ntBASIC6.33□□□□□ -1.4
HOXC6P09630 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.33□□□□□ -1.4
HOXC6P09630 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms