Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 TIMM8BP2-201ENST00000445940 251 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.25□□□□□ -1.57
MT-ND1P03886 AC113398.2-201ENST00000507630 558 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AC021193.1-201ENST00000511607 420 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 SCARNA18.1-201ENST00000516330 83 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 AC138832.1-201ENST00000522871 556 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.25□□□□□ -1.57
MT-ND1P03886 AC096996.1-201ENST00000563813 325 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.25□□□□□ -1.57
MT-ND1P03886 MTATP6P25-201ENST00000574491 261 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AC138207.8-204ENST00000579588 527 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 MIR4776-2-201ENST00000580204 80 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 MIR5010-201ENST00000582846 120 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 MIR4660-201ENST00000583549 74 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 AC090953.1-201ENST00000604305 1092 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 LSM1P2-201ENST00000604911 322 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AC092944.2-201ENST00000605443 889 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.25□□□□□ -1.57
MT-ND1P03886 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.25□□□□□ -1.57
MT-ND1P03886 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 CASC19-274ENST00000642018 970 ntBASIC5.25□□□□□ -1.57
MT-ND1P03886 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MT-ND1P03886 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
MT-ND1P03886 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
MT-ND1P03886 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MT-ND1P03886 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
MT-ND1P03886 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.25□□□□□ -1.57
MT-ND1P03886 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MT-ND1P03886 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
MT-ND1P03886 AC003973.3-201ENST00000624863 2822 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
MT-ND1P03886 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.24□□□□□ -1.57
MT-ND1P03886 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
MT-ND1P03886 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.24□□□□□ -1.57
MT-ND1P03886 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 RNFT1P3-201ENST00000340898 1052 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AL358178.1-201ENST00000407698 397 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 UBE2V2P1-201ENST00000434717 398 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 ARAFP2-201ENST00000440565 559 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 ATP5LP2-201ENST00000440646 311 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 CBX1P2-201ENST00000453841 458 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AC023194.2-201ENST00000465398 406 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC021006.1-201ENST00000489849 553 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AC026782.2-201ENST00000510845 636 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 HSD3BP3-201ENST00000514706 994 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 RN7SKP238-201ENST00000516483 249 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AP002981.1-201ENST00000517692 975 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 WBP1LP3-201ENST00000523033 208 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AL121839.1-201ENST00000556233 1185 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.24□□□□□ -1.57
MT-ND1P03886 RN7SL290P-201ENST00000578661 300 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.24□□□□□ -1.57
MT-ND1P03886 AP002884.5-201ENST00000595053 1132 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC010615.3-201ENST00000597319 394 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AP001437.1-201ENST00000608783 456 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC108673.3-201ENST00000609183 335 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC025262.3-201ENST00000623666 360 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.24□□□□□ -1.57
MT-ND1P03886 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
MT-ND1P03886 MTCO1P22-201ENST00000604619 1360 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 AC027088.4-201ENST00000611559 1947 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 TCP11X1-202ENST00000622971 1372 ntBASIC5.24□□□□□ -1.57
MT-ND1P03886 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
MT-ND1P03886 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
MT-ND1P03886 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.23□□□□□ -1.57
MT-ND1P03886 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.23□□□□□ -1.57
MT-ND1P03886 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MT-ND1P03886 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MT-ND1P03886 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MT-ND1P03886 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
MT-ND1P03886 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.23□□□□□ -1.57
MT-ND1P03886 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MT-ND1P03886 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
MT-ND1P03886 RPS6P23-201ENST00000413224 722 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms