Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORA17.1-201ENST00000362945 126 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 U3.10-201ENST00000364459 214 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL1A1P02452 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL1A1P02452 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL1A1P02452 RNA5SP487-201ENST00000410186 122 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 RNF10P1-201ENST00000418589 369 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 OR10T1P-201ENST00000424327 947 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC6.57□□□□□ -1.36
COL1A1P02452 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC6.57□□□□□ -1.36
COL1A1P02452 AC104634.1-201ENST00000452720 462 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.57□□□□□ -1.36
COL1A1P02452 FTH1P2-201ENST00000466086 412 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.57□□□□□ -1.36
COL1A1P02452 AC011840.5-201ENST00000582125 771 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 AC010329.1-201ENST00000593903 8328 ntBASIC6.57□□□□□ -1.36
COL1A1P02452 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL1A1P02452 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL1A1P02452 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.57□□□□□ -1.36
COL1A1P02452 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.57□□□□□ -1.36
COL1A1P02452 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.57□□□□□ -1.36
COL1A1P02452 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.56□□□□□ -1.36
COL1A1P02452 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 AC104964.3-201ENST00000606115 2860 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL1A1P02452 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.56□□□□□ -1.36
COL1A1P02452 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.56□□□□□ -1.36
COL1A1P02452 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.56□□□□□ -1.36
COL1A1P02452 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6.56□□□□□ -1.36
COL1A1P02452 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.56□□□□□ -1.36
COL1A1P02452 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.56□□□□□ -1.36
COL1A1P02452 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 RPS18P6-201ENST00000476880 458 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 HIGD1AP5-201ENST00000529959 259 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.56□□□□□ -1.36
COL1A1P02452 CR383656.6-201ENST00000550518 394 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 AC114947.2-201ENST00000565748 2125 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.56□□□□□ -1.36
COL1A1P02452 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.56□□□□□ -1.36
COL1A1P02452 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
COL1A1P02452 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL1A1P02452 MAPK10-338ENST00000641647 3362 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL1A1P02452 AL359955.1-201ENST00000455242 3275 ntBASIC6.56□□□□□ -1.36
COL1A1P02452 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 KYNUP3-201ENST00000574386 1341 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 AL078621.3-201ENST00000623707 2042 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
COL1A1P02452 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 RPL11P3-201ENST00000395256 523 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 FABP12P1-201ENST00000401911 322 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.55□□□□□ -1.36
COL1A1P02452 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.55□□□□□ -1.36
COL1A1P02452 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.55□□□□□ -1.36
COL1A1P02452 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6.55□□□□□ -1.36
COL1A1P02452 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.55□□□□□ -1.36
COL1A1P02452 GAPDHP62-201ENST00000515313 990 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.55□□□□□ -1.36
COL1A1P02452 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.55□□□□□ -1.36
COL1A1P02452 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.55□□□□□ -1.36
COL1A1P02452 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.55□□□□□ -1.36
COL1A1P02452 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.55□□□□□ -1.36
COL1A1P02452 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 AL158152.1-201ENST00000602652 1435 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.55□□□□□ -1.36
COL1A1P02452 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
COL1A1P02452 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 AC144833.1-201ENST00000567953 4089 ntBASIC6.55□□□□□ -1.36
COL1A1P02452 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
COL1A1P02452 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
COL1A1P02452 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL1A1P02452 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
COL1A1P02452 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
COL1A1P02452 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms