Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC025458.1-201ENST00000506046 166 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 GAPDHP71-201ENST00000511530 1003 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 VTA1P2-201ENST00000520205 911 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC027369.2-201ENST00000528030 440 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 PCNAP4-201ENST00000532690 730 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 AC126615.2-201ENST00000553003 515 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 AC006530.1-201ENST00000555980 571 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.41□□□□□ -1.54
NKX2-2O95096 MIR4271-201ENST00000582451 67 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 AP002884.5-201ENST00000595053 1132 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 AL513327.3-201ENST00000602618 469 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC005776.1-201ENST00000603164 290 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC5.41□□□□□ -1.54
NKX2-2O95096 AL163051.2-201ENST00000618976 735 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 RPL23AP61-201ENST00000623642 466 ntBASIC5.41□□□□□ -1.54
NKX2-2O95096 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
NKX2-2O95096 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NKX2-2O95096 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.41□□□□□ -1.54
NKX2-2O95096 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
NKX2-2O95096 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 IFIT1P1-201ENST00000400497 1449 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AL158152.1-201ENST00000602652 1435 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 AC020656.2-201ENST00000613291 5309 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 MFSD8-239ENST00000641590 2479 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NKX2-2O95096 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.4□□□□□ -1.54
NKX2-2O95096 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
NKX2-2O95096 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.54
NKX2-2O95096 RNA5SP477-201ENST00000362639 119 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
NKX2-2O95096 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX2-2O95096 RPS26P13-201ENST00000419030 330 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.4□□□□□ -1.54
NKX2-2O95096 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX2-2O95096 NDUFS5P5-201ENST00000437256 321 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX2-2O95096 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.4□□□□□ -1.54
NKX2-2O95096 EIF5AP4-201ENST00000441206 465 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.4□□□□□ -1.54
NKX2-2O95096 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 AC092691.2-201ENST00000461787 803 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.4□□□□□ -1.54
NKX2-2O95096 RPL37P23-201ENST00000492641 294 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 SUMO1P1-201ENST00000497904 306 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 ST13P12-201ENST00000508958 1094 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 HMGN1P15-201ENST00000513870 295 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AC022826.1-201ENST00000519383 805 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC5.4□□□□□ -1.54
NKX2-2O95096 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.4□□□□□ -1.54
NKX2-2O95096 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX2-2O95096 AC060780.2-201ENST00000589047 198 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
NKX2-2O95096 BNIP3P19-201ENST00000605397 577 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AC019131.2-201ENST00000609071 870 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.4□□□□□ -1.54
NKX2-2O95096 AC097460.3-201ENST00000623099 442 ntBASIC5.4□□□□□ -1.54
NKX2-2O95096 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.4□□□□□ -1.54
NKX2-2O95096 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NKX2-2O95096 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.4□□□□□ -1.55
NKX2-2O95096 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.4□□□□□ -1.55
NKX2-2O95096 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NKX2-2O95096 AC117409.1-201ENST00000470499 1310 ntBASIC5.4□□□□□ -1.55
NKX2-2O95096 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.4□□□□□ -1.55
NKX2-2O95096 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NKX2-2O95096 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
NKX2-2O95096 PDZK1P1-202ENST00000425209 1350 ntBASIC5.4□□□□□ -1.55
NKX2-2O95096 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
NKX2-2O95096 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
NKX2-2O95096 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
NKX2-2O95096 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
NKX2-2O95096 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.4□□□□□ -1.55
NKX2-2O95096 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX2-2O95096 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX2-2O95096 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.39□□□□□ -1.55
NKX2-2O95096 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
NKX2-2O95096 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms