Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
UPK1BO75841 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 AC129915.3-201ENST00000634128 948 ntBASIC4.68□□□□□ -1.66
UPK1BO75841 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
UPK1BO75841 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.68□□□□□ -1.66
UPK1BO75841 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
UPK1BO75841 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.68□□□□□ -1.66
UPK1BO75841 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
UPK1BO75841 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
UPK1BO75841 AC063976.2-201ENST00000425667 3556 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 AL133268.1-201ENST00000405676 1401 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
UPK1BO75841 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1BO75841 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.67□□□□□ -1.66
UPK1BO75841 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.67□□□□□ -1.66
UPK1BO75841 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1BO75841 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1BO75841 FABP7P2-201ENST00000429946 379 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 GAPDHP37-201ENST00000442317 968 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 PPIAP7-201ENST00000454070 489 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 RN7SL583P-201ENST00000475692 287 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 AP002884.1-201ENST00000479691 655 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.67□□□□□ -1.66
UPK1BO75841 AC135983.3-201ENST00000528049 1226 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1BO75841 AC011270.1-201ENST00000558606 583 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 AC010287.1-201ENST00000566916 357 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 RN7SL176P-201ENST00000580352 264 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.67□□□□□ -1.66
UPK1BO75841 AP000769.2-201ENST00000602344 396 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 TMEM30CP-203ENST00000637814 1035 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 KARSP1-201ENST00000451871 1752 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UPK1BO75841 GDA-209ENST00000545168 5362 ntTSL 2 BASIC4.67□□□□□ -1.66
UPK1BO75841 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.67□□□□□ -1.66
UPK1BO75841 MIPEPP2-201ENST00000422560 1819 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.67□□□□□ -1.66
UPK1BO75841 SAMMSON-213ENST00000641336 1521 ntBASIC4.67□□□□□ -1.66
UPK1BO75841 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
UPK1BO75841 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 BTBD10P1-201ENST00000549824 1352 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1BO75841 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1BO75841 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
UPK1BO75841 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
UPK1BO75841 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
UPK1BO75841 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UPK1BO75841 RNU1-134P-201ENST00000362935 165 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 RN7SKP153-201ENST00000365026 316 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 LINC01353-201ENST00000412772 775 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1BO75841 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1BO75841 SMC4P1-201ENST00000414479 527 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AL359475.1-201ENST00000414505 292 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1BO75841 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1BO75841 GPN3P1-201ENST00000423883 535 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 AC245291.3-201ENST00000443400 292 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AL845321.1-201ENST00000444603 348 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1BO75841 AC073587.1-201ENST00000447093 876 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AC108751.2-201ENST00000469993 231 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AC093890.1-201ENST00000502554 540 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AC113367.2-201ENST00000505749 160 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1BO75841 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.66□□□□□ -1.66
UPK1BO75841 RNA5SP249-201ENST00000516127 99 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AC134698.5-201ENST00000519444 336 ntBASIC4.66□□□□□ -1.66
UPK1BO75841 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.66□□□□□ -1.66
UPK1BO75841 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UPK1BO75841 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1BO75841 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC4.66□□□□□ -1.66
UPK1BO75841 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms