Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.84□□□□□ -1.47
SMAD6O43541 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.84□□□□□ -1.47
SMAD6O43541 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.84□□□□□ -1.47
SMAD6O43541 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.84□□□□□ -1.47
SMAD6O43541 BNIP3P27-201ENST00000599991 412 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AC063977.5-201ENST00000601044 974 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 KATNBL1P1-201ENST00000605192 748 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AC009269.6-201ENST00000621778 588 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SMAD6O43541 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
SMAD6O43541 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
SMAD6O43541 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.83□□□□□ -1.48
SMAD6O43541 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC117409.1-201ENST00000470499 1310 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AL627171.1-201ENST00000618845 1308 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.83□□□□□ -1.48
SMAD6O43541 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SMAD6O43541 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 NIFKP3-201ENST00000417799 865 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.83□□□□□ -1.48
SMAD6O43541 USP24P1-201ENST00000433802 779 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AL390879.1-201ENST00000439143 386 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 DNAJC19P5-201ENST00000443295 316 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.83□□□□□ -1.48
SMAD6O43541 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC023141.9-201ENST00000458734 412 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 AC073610.1-201ENST00000489971 396 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 OR7E157P-201ENST00000494376 911 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC105384.2-201ENST00000508433 640 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC138866.2-201ENST00000508650 584 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 IGKV2-19-201ENST00000518132 283 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.83□□□□□ -1.48
SMAD6O43541 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 HNRNPCP1-201ENST00000556181 766 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 AC011445.2-201ENST00000599274 173 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 AL031658.2-201ENST00000616850 651 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AL391597.1-201ENST00000618707 694 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC010809.3-201ENST00000621310 641 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC243960.7-201ENST00000623532 707 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.83□□□□□ -1.48
SMAD6O43541 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 MAPK10-350ENST00000641777 965 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.83□□□□□ -1.48
SMAD6O43541 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.83□□□□□ -1.48
SMAD6O43541 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SMAD6O43541 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.83□□□□□ -1.48
SMAD6O43541 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SMAD6O43541 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.82□□□□□ -1.48
SMAD6O43541 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 AP005432.1-201ENST00000580891 3485 ntBASIC5.82□□□□□ -1.48
SMAD6O43541 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.82□□□□□ -1.48
SMAD6O43541 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.82□□□□□ -1.48
SMAD6O43541 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SMAD6O43541 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms