Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RN7SKP275-201ENST00000364626 301 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 OR7E156P-201ENST00000400303 464 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 OR7E101P-201ENST00000400428 513 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 PPIAP9-201ENST00000403866 498 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AC099535.1-201ENST00000408928 371 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.65□□□□□ -1.67
SDCBPO00560 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.65□□□□□ -1.67
SDCBPO00560 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.65□□□□□ -1.67
SDCBPO00560 AL512637.1-201ENST00000439523 1231 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AL596266.1-201ENST00000448132 400 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.65□□□□□ -1.67
SDCBPO00560 RPSAP37-201ENST00000470913 821 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 RPS17P15-201ENST00000475609 349 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AC091912.1-201ENST00000511351 248 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.65□□□□□ -1.67
SDCBPO00560 RNA5SP230-201ENST00000517039 122 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 TRIM77BP-201ENST00000524985 1119 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AC130364.2-201ENST00000528639 604 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 HSPE1P2-201ENST00000554777 306 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.65□□□□□ -1.67
SDCBPO00560 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.65□□□□□ -1.67
SDCBPO00560 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.65□□□□□ -1.67
SDCBPO00560 AC108738.1-201ENST00000603703 237 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.65□□□□□ -1.67
SDCBPO00560 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.65□□□□□ -1.67
SDCBPO00560 AC087565.3-203ENST00000641018 837 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SDCBPO00560 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SDCBPO00560 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SDCBPO00560 MUC2-202ENST00000613187 4845 ntBASIC4.65□□□□□ -1.67
SDCBPO00560 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.67
SDCBPO00560 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SDCBPO00560 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.65□□□□□ -1.67
SDCBPO00560 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.65□□□□□ -1.67
SDCBPO00560 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
SDCBPO00560 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.65□□□□□ -1.67
SDCBPO00560 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SDCBPO00560 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SDCBPO00560 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 ADAM5-202ENST00000399789 1942 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.64□□□□□ -1.67
SDCBPO00560 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SDCBPO00560 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SDCBPO00560 AL009179.1-201ENST00000406085 265 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AP006222.1-205ENST00000450734 457 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AC087672.1-201ENST00000479876 766 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 IGBP1P4-201ENST00000503202 879 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC021106.1-201ENST00000509020 1058 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 HMGB1P42-201ENST00000532126 553 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.64□□□□□ -1.67
SDCBPO00560 NMNAT1P5-201ENST00000559657 841 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.64□□□□□ -1.67
SDCBPO00560 SETP3-201ENST00000581726 813 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AC015802.2-201ENST00000589690 189 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC079315.1-201ENST00000602952 623 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AC009237.13-201ENST00000603193 276 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 LSM1P2-201ENST00000604911 322 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 RPL12P48-201ENST00000605620 304 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 RN7SL544P-201ENST00000617232 284 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 RN7SL763P-201ENST00000620922 284 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.64□□□□□ -1.67
SDCBPO00560 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 AC100757.1-201ENST00000616872 1835 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.64□□□□□ -1.67
SDCBPO00560 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SDCBPO00560 MT-RNR2-201ENST00000387347 1559 ntBASIC4.64□□□□□ -1.67
SDCBPO00560 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms