Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC005224.3-201ENST00000584683 2140 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC117409.1-201ENST00000470499 1310 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC093166.4-201ENST00000457867 318 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 RN7SL72P-201ENST00000460697 269 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 RN7SL184P-201ENST00000488308 297 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 NPM1P28-201ENST00000492269 840 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR10G5P-201ENST00000532733 358 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC090286.3-201ENST00000573133 187 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC037198.3-201ENST00000616754 526 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC022919.1-201ENST00000624979 626 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 SAMMSON-209ENST00000641222 1100 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 CASC19-264ENST00000641912 1184 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC079776.5-201ENST00000641920 211 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 SAMMSON-227ENST00000642114 1199 ntBASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
TMX2-CTNND1H3BSU7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC053481.2-202ENST00000582394 1500 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 RN7SKP59-201ENST00000410520 314 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL158827.1-201ENST00000416300 391 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 RPS27AP6-201ENST00000427962 448 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 RPS27P18-201ENST00000431701 247 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 CFL1P1-202ENST00000432948 411 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 RN7SL799P-201ENST00000475891 298 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 OR7E158P-201ENST00000524483 910 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 MIR4433B-201ENST00000581329 102 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC090607.5-201ENST00000615692 224 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC02019-201ENST00000608605 2060 ntBASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.55□□□□□ -1.52
TMX2-CTNND1H3BSU7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL590763.1-201ENST00000398297 1545 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 RNA5SP319-201ENST00000362768 119 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 RN7SKP186-201ENST00000365371 303 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 RNU4-2-201ENST00000365668 141 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 SPTLC1P2-201ENST00000407089 121 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 VTI1BP4-201ENST00000427516 527 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 CLUHP1-201ENST00000435012 1190 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 FMO7P-201ENST00000436045 768 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 EIF1P7-201ENST00000487533 337 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 AL049779.3-201ENST00000557141 606 ntBASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TMX2-CTNND1H3BSU7 DPPA2P4-201ENST00000563717 878 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms