Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC026523.2-201ENST00000625039 7739 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC073136.1-201ENST00000449426 2884 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 RN7SKP187-201ENST00000365536 330 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 SNORA48.4-201ENST00000391089 134 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AL035660.1-201ENST00000422041 222 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC127526.2-201ENST00000426436 775 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC093166.3-201ENST00000448785 303 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 PRPF38AP1-201ENST00000451976 933 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 RN7SL168P-201ENST00000463821 279 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC104339.1-201ENST00000465478 348 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC027369.2-201ENST00000528030 440 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC027369.5-201ENST00000533838 755 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC068305.2-201ENST00000550567 1205 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC002310.3-201ENST00000569728 723 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AL365181.4-201ENST00000609800 547 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC244107.2-201ENST00000611773 76 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 RN7SL544P-201ENST00000617232 284 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 RN7SL763P-201ENST00000620922 284 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 AC087565.3-203ENST00000641018 837 ntBASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.45□□□□□ -1.54
TRIM49D1C9J1S8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 NEPNP-201ENST00000404786 1371 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 OR9K1P-201ENST00000326513 941 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 RNA5SP131-201ENST00000365452 119 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC007618.1-201ENST00000366455 732 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 RPL12P9-201ENST00000412942 488 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AL512637.1-201ENST00000439523 1231 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC092106.1-201ENST00000444291 373 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AP000547.1-201ENST00000454360 617 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AL049874.2-201ENST00000492636 288 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC025458.1-201ENST00000506046 166 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC109464.1-201ENST00000511091 819 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 Vault.2-201ENST00000516519 98 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC106730.2-201ENST00000566641 540 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 MIR6806-201ENST00000622141 64 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AL683826.1-201ENST00000624104 627 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 AC099654.6-201ENST00000636487 512 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 SRRM1P3-201ENST00000426911 2678 ntBASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
TRIM49D1C9J1S8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms