Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
PCDHB11Q9Y5F2 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 EVI2A-203ENST00000462804 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC106712.1-201ENST00000483840 1888 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 CDR1-202ENST00000625883 1485 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF37BP-203ENST00000452306 1352 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 IL15-207ENST00000514653 1388 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 Y_RNA.97-201ENST00000363094 102 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 Y_RNA.326-201ENST00000365176 113 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 RNU6-185P-201ENST00000384421 107 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 SNORA70I-201ENST00000384544 135 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 IYD-205ENST00000392256 882 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 VIM2P-201ENST00000402383 1294 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AL354751.2-201ENST00000415471 210 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC003071.2-201ENST00000423857 315 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC005534.2-201ENST00000431047 433 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AL356311.1-201ENST00000451697 258 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AL139156.3-201ENST00000454802 394 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PSMC1P13-201ENST00000458195 985 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AP005202.1-201ENST00000489915 867 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 OR10J9P-201ENST00000511932 987 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AF131216.2-201ENST00000512316 564 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 RN7SKP2-201ENST00000517003 319 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 IGHV3-63-201ENST00000518422 341 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MTND6P19-201ENST00000519399 524 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 FAM92A1P1-201ENST00000528023 890 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 DRAIC-206ENST00000559029 309 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MIR5697-201ENST00000578045 78 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC010928.3-201ENST00000587712 541 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC008770.1-209ENST00000591898 356 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 SUGT1P3-202ENST00000604259 383 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MIR6774-201ENST00000614651 70 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AL606760.4-201ENST00000617613 718 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PART1_3.1-201ENST00000619680 131 ntBASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 LEKR1-204ENST00000470811 2881 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MMP20-201ENST00000260228 1956 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 CSNK2A3-201ENST00000528848 1416 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PCDHB11Q9Y5F2 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 MAPK10-279ENST00000641157 2449 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 OR9Q1-201ENST00000335397 2488 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 AC112255.1-201ENST00000624070 2493 ntBASIC7.5□□□□□ -1.21
PCDHB11Q9Y5F2 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms