Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AL512329.2-201ENST00000607350 548 ntBASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AC239803.2-201ENST00000610161 430 ntBASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AC016769.4-201ENST00000616893 535 ntBASIC5.89□□□□□ -1.47
YIPF1Q9Y548 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AC109780.1-201ENST00000451768 1344 ntBASIC5.89□□□□□ -1.47
YIPF1Q9Y548 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
YIPF1Q9Y548 AL449283.1-201ENST00000602631 3403 ntBASIC5.89□□□□□ -1.47
YIPF1Q9Y548 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RNA5SP183-201ENST00000362452 119 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RNU4-34P-201ENST00000410431 124 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RPS21P8-201ENST00000413365 247 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 MTND4LP17-201ENST00000414607 293 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RPL7L1P9-201ENST00000431298 745 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC073410.1-201ENST00000435125 589 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RSU1P1-201ENST00000453416 441 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RPS7P6-201ENST00000485777 579 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC024558.1-201ENST00000505008 528 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 HIGD1AP14-201ENST00000507617 282 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RNA5SP92-201ENST00000516437 110 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 GMCL1P2-201ENST00000605230 823 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 NANOGP3-201ENST00000605855 286 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC000068.2-201ENST00000608816 460 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 SAMMSON-209ENST00000641222 1100 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 AC006600.2-201ENST00000624834 2506 ntBASIC5.88□□□□□ -1.47
YIPF1Q9Y548 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.88□□□□□ -1.47
YIPF1Q9Y548 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 MIR551A-201ENST00000385042 96 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 RPL23AP17-201ENST00000401064 499 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 SPTLC1P2-201ENST00000407089 121 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AL390879.1-201ENST00000439143 386 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 CNOT7P2-201ENST00000441051 832 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 RPL7P39-201ENST00000481157 744 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC004825.1-201ENST00000555068 586 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 MTCO1P1-201ENST00000624263 1081 ntBASIC5.87□□□□□ -1.47
YIPF1Q9Y548 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YIPF1Q9Y548 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms