Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC073869.8-201ENST00000641806 335 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC008691.1-209ENST00000642094 814 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AC109446.4-201ENST00000623235 2755 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 RPS2P45-201ENST00000469997 2057 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 AL132656.3-201ENST00000606384 1595 ntBASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
VPS29Q9UBQ0 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC107977.1-201ENST00000355745 939 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 U3.23-201ENST00000391132 200 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 PPIAP9-201ENST00000403866 498 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 DPPA2P2-201ENST00000418220 897 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 RPL34P3-201ENST00000421454 338 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AL662874.1-201ENST00000426065 230 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AL450023.1-201ENST00000450868 751 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 VDAC2P4-201ENST00000452925 711 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 PFN1P8-201ENST00000497012 543 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC114786.1-201ENST00000512892 1415 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 CYCSP22-201ENST00000517555 339 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC005363.1-201ENST00000530779 351 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 MRPS21P7-201ENST00000566937 238 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 AC100757.1-201ENST00000616872 1835 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
VPS29Q9UBQ0 YES1P1-201ENST00000418510 1628 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 LYPLA1P3-201ENST00000402650 695 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 OR2AT2P-201ENST00000413438 905 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC093155.2-201ENST00000420734 937 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 OR6D1P-201ENST00000436165 939 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 HMGN1P2-201ENST00000445197 310 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 LDHBP2-201ENST00000456969 1005 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 RPSAP51-201ENST00000497462 645 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 PPATP2-201ENST00000605635 508 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AL022394.1-201ENST00000606979 292 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC241377.1-201ENST00000619797 406 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 AP001029.2-203ENST00000589795 4910 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
VPS29Q9UBQ0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms