Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 TSPAN8-203ENST00000546561 1168 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CR383656.6-201ENST00000550518 394 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 HIGD1AP9-201ENST00000550710 279 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 GTF2IP22-201ENST00000554443 182 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 PCMTD1P2-201ENST00000565017 355 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC122134.1-201ENST00000565664 1104 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 MIR4685-201ENST00000578185 69 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC233280.2-201ENST00000603917 1070 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 AC069304.2-201ENST00000605154 435 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 PLEKHS1-207ENST00000619563 3247 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CUL4B-201ENST00000336592 3109 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 CDC27P2-201ENST00000425026 1922 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 OFD1P17-201ENST00000437639 3018 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 SLC9B1P1-201ENST00000331172 1337 ntBASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 TTI1-201ENST00000373447 3825 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 JAM3-202ENST00000441717 3363 ntTSL 2 BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CUEDC1Q9NWM3 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 CR383658.2-201ENST00000547576 1525 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC017007.4-201ENST00000503353 1352 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ZNF337-201ENST00000252979 3205 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 OR4K15-201ENST00000305051 1216 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ENSA-207ENST00000362052 703 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 Y_RNA.394-201ENST00000383942 103 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 RNU4-31P-201ENST00000384211 141 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 RNA5SP23-201ENST00000391006 105 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC068533.2-201ENST00000411872 306 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AL358942.1-201ENST00000418595 1178 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 FO393419.3-201ENST00000428741 282 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 BOLL-204ENST00000430004 2987 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 HMGB3P10-201ENST00000434734 572 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 PDSS1P2-201ENST00000449397 678 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AL513533.1-201ENST00000453728 415 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 SNRPFP4-201ENST00000456366 242 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 RPS4XP15-201ENST00000489210 795 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC108078.1-201ENST00000508073 725 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC117473.1-201ENST00000508616 392 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 SNORA31.13-201ENST00000516624 135 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC013701.1-201ENST00000522657 465 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AP006587.5-201ENST00000532033 739 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 SDHCP4-201ENST00000532834 510 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 EGLN3P1-201ENST00000541727 720 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 OR4F28P-201ENST00000559128 938 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 EIF4EBP2P2-201ENST00000563883 333 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 AP005210.1-201ENST00000583659 544 ntTSL 2 BASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 MIR548AB-201ENST00000584917 84 ntBASIC7.47□□□□□ -1.21
CUEDC1Q9NWM3 OR4F8P-201ENST00000589943 937 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms