Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC007599.1-201ENST00000568688 1174 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC005244.1-201ENST00000582566 339 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AL352984.2-201ENST00000611153 546 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 SDR42E1P1-201ENST00000611327 477 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC022306.2-201ENST00000617563 647 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 CA1-225ENST00000626824 2405 ntTSL 5 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC015689.2-201ENST00000528172 1738 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC096656.1-201ENST00000623826 1364 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC123769.1-201ENST00000530992 3192 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 TNPO1P2-201ENST00000426249 2665 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 AC093909.5-201ENST00000621839 1799 ntBASIC7.03□□□□□ -1.28
PDLIM7Q9NR12 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC7.02□□□□□ -1.28
PDLIM7Q9NR12 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 GSTM2-207ENST00000460717 1449 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 TMSB4XP2-201ENST00000335179 210 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 RNA5SP350-201ENST00000363298 111 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AL513325.1-201ENST00000417716 1034 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 RPS7P2-201ENST00000435134 607 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 UCK2-205ENST00000469256 753 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 SYT14P1-201ENST00000481459 721 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 RPL34P33-201ENST00000486062 334 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AL136038.1-201ENST00000497246 351 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 MTND6P8-201ENST00000503471 522 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC138409.2-202ENST00000507274 458 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC008494.2-201ENST00000514544 370 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 NOP56P3-201ENST00000549457 385 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC010735.1-201ENST00000567305 1026 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 CCDC58P3-201ENST00000590792 430 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC073387.2-201ENST00000604797 784 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 HMGB1P51-201ENST00000605166 638 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC018638.7-201ENST00000605836 1114 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AL021707.7-201ENST00000607991 416 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC108673.3-201ENST00000609183 335 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 HULC.1-201ENST00000612720 240 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 RFPL4AP6-201ENST00000616792 846 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC092608.3-201ENST00000625017 386 ntBASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDLIM7Q9NR12 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 AL133243.2-201ENST00000610331 1621 ntBASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PDLIM7Q9NR12 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms