Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 AC106774.10-201ENST00000638486 599 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 AKT3-203ENST00000366539 5127 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 FHL1-216ENST00000535737 2325 ntTSL 3 BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 AC133552.3-201ENST00000572236 1869 ntBASIC9.74□□□□□ -0.85
RTN4Q9NQC3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
RTN4Q9NQC3 MARK3-203ENST00000335102 2331 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 KIT-201ENST00000288135 5186 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CDY22P-201ENST00000451423 1554 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 BPIFA1-203ENST00000375422 1063 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 NHP2P2-201ENST00000396362 460 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 NXNP1-201ENST00000397383 1051 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 RPL31P52-201ENST00000407532 367 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AL359704.1-201ENST00000411586 781 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 OR2L6P-201ENST00000416377 940 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 RPL21P111-201ENST00000418453 477 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AL359541.1-201ENST00000431097 575 ntTSL 3 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 USP24P1-201ENST00000433802 779 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC012307.1-201ENST00000449242 197 ntTSL 3 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 RN7SL370P-201ENST00000470869 295 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 RPL23AP72-201ENST00000492447 435 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC100771.1-201ENST00000496450 279 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC093767.1-201ENST00000504523 156 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC112225.1-201ENST00000508230 297 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AP000866.3-201ENST00000534607 433 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 TRAV33-201ENST00000557514 338 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AL627309.8-201ENST00000595919 284 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC068790.5-201ENST00000602741 355 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CR769775.3-201ENST00000610388 219 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC000123.2-201ENST00000623124 461 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 OR1B1-201ENST00000623530 995 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC011483.4-201ENST00000623621 585 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC092125.1-201ENST00000562568 1995 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CEP63-202ENST00000337090 5632 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AL122126.1-201ENST00000546905 1318 ntBASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CREM-217ENST00000439705 2306 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 CAST-202ENST00000325674 3356 ntTSL 5 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 C12orf77-202ENST00000549262 1443 ntTSL 4 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
RTN4Q9NQC3 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 VSIG4-201ENST00000374737 1834 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 OR55B1P-203ENST00000641518 2602 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC022507.1-201ENST00000548349 1505 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 SLC25A14-201ENST00000218197 1616 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC096992.2-201ENST00000609553 1684 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 NECAP1P1-201ENST00000320802 830 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 Y_RNA.38-201ENST00000362617 102 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RNY1P12-201ENST00000364251 105 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 MT-TD-201ENST00000387419 68 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 RNU6-780P-201ENST00000391030 104 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 NUS1P4-201ENST00000401550 585 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 GAPDHP63-201ENST00000405405 1007 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 HMGB3P20-201ENST00000417997 600 ntBASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 LINC02068-202ENST00000424941 563 ntTSL 2 BASIC9.72□□□□□ -0.85
RTN4Q9NQC3 AC108448.2-201ENST00000431546 730 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms