Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 RN7SKP29-201ENST00000410957 272 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 RANP7-201ENST00000418085 644 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC090018.1-201ENST00000434369 367 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 RPS10P14-201ENST00000440748 502 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 HMGB3P14-201ENST00000494195 599 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AP000926.3-201ENST00000497201 299 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC009567.2-201ENST00000502989 349 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC112184.1-201ENST00000505179 312 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 HMGB3P16-201ENST00000508037 287 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC022360.1-201ENST00000521058 340 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 CHEK2P2-201ENST00000554701 672 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AL512430.4-201ENST00000603085 613 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AC244107.2-201ENST00000611773 76 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 AL512652.1-201ENST00000619006 500 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 CASC19-255ENST00000641733 1385 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 MT-RNR2-201ENST00000387347 1559 ntBASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.63□□□□□ -1.51
VIPAS39Q9H9C1 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 OR9G4-201ENST00000302957 984 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 RNU1-19P-201ENST00000363306 165 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 YWHAZP4-201ENST00000392459 708 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 UBTFL2-201ENST00000411859 1191 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC013268.2-201ENST00000420753 337 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AL031584.1-201ENST00000447169 754 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AP002371.1-201ENST00000463604 433 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 CBX1P5-201ENST00000475330 559 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 RPL12P30-201ENST00000488389 499 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AL133372.1-201ENST00000493565 745 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC113398.2-201ENST00000507630 558 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 GAPDHP71-201ENST00000511530 1003 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 SNORA74.1-201ENST00000516320 180 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 TDGP1-201ENST00000543961 1229 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 SETP1-201ENST00000556014 845 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AL078624.2-201ENST00000605063 554 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 Z95327.3-201ENST00000610385 572 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC068726.1-201ENST00000610993 341 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
VIPAS39Q9H9C1 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms