Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC007842.1-201ENST00000597336 2039 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 OR7E25P-201ENST00000344844 931 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 RN7SKP145-201ENST00000363291 303 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 OR7E156P-201ENST00000400303 464 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 RIMKLBP2-201ENST00000424737 654 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 RPS27AP6-201ENST00000427962 448 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 MED28P3-201ENST00000444288 531 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 RPS23P6-201ENST00000466136 431 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC011476.1-201ENST00000466725 307 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC090602.1-201ENST00000469695 252 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 RN7SL188P-201ENST00000469842 285 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC087672.1-201ENST00000479876 766 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 RN7SL741P-201ENST00000482473 289 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 OR5AM1P-201ENST00000532136 1032 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 DPPA2P4-201ENST00000563717 878 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AL139124.1-201ENST00000609123 421 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 ADAM24P-201ENST00000398655 2101 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AC104964.3-201ENST00000606115 2860 ntBASIC5.69□□□□□ -1.5
LRRC40Q9H9A6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC005261.6-201ENST00000623072 1387 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC068870.1-201ENST00000563737 2455 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 RNU6-167P-201ENST00000384292 106 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 U3.28-201ENST00000391249 210 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 RN7SKP240-201ENST00000410583 375 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AL133482.1-201ENST00000415988 498 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC006335.2-201ENST00000437993 330 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AL359265.1-201ENST00000440296 795 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 CYCSP51-201ENST00000443545 318 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 IGBP1P3-201ENST00000447449 1000 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 TRBV8-1-201ENST00000481590 279 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 MRPS16P1-201ENST00000523462 412 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC079600.1-201ENST00000550326 297 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC134669.1-201ENST00000581275 672 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC079315.1-201ENST00000602952 623 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 AC108865.2-201ENST00000606881 432 ntBASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LRRC40Q9H9A6 Z83820.1-201ENST00000456978 1499 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms