Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RPL9P6-201ENST00000492764 598 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 FAM92A1P2-202ENST00000504766 877 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC138409.2-202ENST00000507274 458 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC093824.1-201ENST00000508796 343 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 OR7E83P-201ENST00000511021 970 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 SETP21-201ENST00000514799 892 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 PCMTD1P2-201ENST00000565017 355 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC064805.1-203ENST00000577560 526 ntTSL 3 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 MIR3135A-201ENST00000578460 77 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 FGF7P1-201ENST00000582820 288 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 MIR548AB-201ENST00000584917 84 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AL135999.3-201ENST00000610501 812 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC135050.6-202ENST00000613584 392 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AC116165.3-201ENST00000614524 400 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 TTN-AS1-265ENST00000627661 806 ntTSL 5 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 DCAF13P3-201ENST00000561147 1334 ntBASIC6.9□□□□□ -1.3
BHLHE41Q9C0J9 AJ009632.1-201ENST00000433588 1376 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 EEF1A1P22-201ENST00000559385 1380 ntBASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 AL354685.2-201ENST00000448218 1447 ntBASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 WASF5P-205ENST00000428639 1455 ntBASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 CLUL1-201ENST00000338387 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.9□□□□□ -1.31
BHLHE41Q9C0J9 AL137918.1-201ENST00000624542 1922 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 ADAL-202ENST00000422466 3767 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 RNA5SP448-201ENST00000363151 111 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 RN7SKP211-201ENST00000363328 315 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 Y_RNA.408-201ENST00000383987 102 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MIR181C-201ENST00000384881 110 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MIR128-2-201ENST00000384893 84 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC113608.1-201ENST00000398740 305 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 RPL7P30-201ENST00000420888 709 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC245054.1-201ENST00000420944 258 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC009480.2-201ENST00000422916 432 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 FTH1P16-201ENST00000435241 552 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MTCO3P18-201ENST00000440206 761 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 OR13K1P-201ENST00000444577 975 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 VN1R10P-201ENST00000447106 875 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MTND6P5-201ENST00000448266 512 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 RN7SL325P-201ENST00000460434 283 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 KLF3P2-201ENST00000465138 268 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AL672167.3-201ENST00000465951 960 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MTND6P6-201ENST00000478031 263 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 RFPL4AP3-201ENST00000515267 345 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 GTF2IP8-201ENST00000560687 584 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC125494.2-201ENST00000602431 657 ntBASIC6.89□□□□□ -1.31
BHLHE41Q9C0J9 AC011453.2-201ENST00000603737 729 ntBASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms