Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 RN7SKP74-201ENST00000362849 309 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 RNA5SP346-201ENST00000363541 121 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 U3.7-201ENST00000363668 216 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 SNORA70-201ENST00000384436 135 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AL136231.1-201ENST00000429407 730 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 CFL1P4-201ENST00000451536 498 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 NDUFB5P1-201ENST00000508134 564 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 KHDC1P1-201ENST00000511053 508 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 RNA5SP34-201ENST00000516887 130 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC092865.1-201ENST00000544395 1023 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC022404.1-201ENST00000555320 273 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC060780.2-201ENST00000589047 198 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC004890.3-201ENST00000605566 1095 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 SNORA74.4-201ENST00000607595 199 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 AC022106.1-201ENST00000612834 766 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TRIM4Q9C037 C4BPAP1-201ENST00000415474 1893 ntBASIC5.81□□□□□ -1.48
TRIM4Q9C037 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TRIM4Q9C037 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC008627.1-201ENST00000517511 1704 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 PTCD2P2-201ENST00000415579 1095 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 IGLV3-4-201ENST00000432300 244 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC023271.1-201ENST00000445936 1090 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AP006222.1-205ENST00000450734 457 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 RN7SL826P-201ENST00000479724 288 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 RNA5SP434-201ENST00000516647 121 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC244502.2-201ENST00000543361 851 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AC245014.3-201ENST00000618589 347 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AL035661.1-201ENST00000620459 1144 ntBASIC5.8□□□□□ -1.48
TRIM4Q9C037 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
TRIM4Q9C037 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
TRIM4Q9C037 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM4Q9C037 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TRIM4Q9C037 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms