Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC002310.3-201ENST00000569728 723 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AL161912.3-201ENST00000605404 628 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AP003072.5-201ENST00000623872 773 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AL390318.1-201ENST00000624564 687 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 OR8G3P-202ENST00000641572 1255 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 EEF1A1P21-201ENST00000512363 1344 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 NEPNP-201ENST00000404786 1371 ntBASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HDHD3Q9BSH5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 SRRM1P3-201ENST00000426911 2678 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AL355994.1-201ENST00000424379 260 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AL022331.1-201ENST00000429025 477 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AL136231.1-201ENST00000429407 730 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC093166.3-201ENST00000448785 303 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AL358876.1-201ENST00000453364 1075 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AP000547.1-201ENST00000454360 617 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC087672.1-201ENST00000479876 766 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 DEFB109A-201ENST00000482450 265 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 RPS3AP15-201ENST00000483874 781 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 LSM3P4-201ENST00000502948 309 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC025458.1-201ENST00000506046 166 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC026782.2-201ENST00000510845 636 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 HMGB1P42-201ENST00000532126 553 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 OR11H3P-201ENST00000554547 982 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AL359219.2-201ENST00000555184 348 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC092944.2-201ENST00000605443 889 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 MIR6806-201ENST00000622141 64 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC135068.5-201ENST00000624197 983 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AP000550.3-201ENST00000637734 379 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 AC073869.8-201ENST00000641806 335 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 SYT14P1-202ENST00000600441 1448 ntBASIC4.61□□□□□ -1.67
HDHD3Q9BSH5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 TET1P1-201ENST00000426627 2301 ntBASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 SNORA81-201ENST00000408493 178 ntBASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 AL512637.1-201ENST00000439523 1231 ntBASIC4.6□□□□□ -1.67
HDHD3Q9BSH5 RPS10P18-201ENST00000442662 495 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms