Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 LINC01613-201ENST00000561476 2780 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC016772.1-201ENST00000444170 1261 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 RBMY2HP-201ENST00000457961 720 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC092865.4-201ENST00000477936 615 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 RPS4XP17-201ENST00000479057 754 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 RN7SL273P-201ENST00000481561 299 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 RPL32P33-201ENST00000487023 394 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AP002453.1-201ENST00000492327 668 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 NIFKP7-201ENST00000503365 834 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 SCARNA20.4-201ENST00000516969 131 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC009879.1-201ENST00000520029 839 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 WBP1LP11-201ENST00000586141 328 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RHOXF2Q9BQY4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC022417.1-201ENST00000624768 1303 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AL159987.1-201ENST00000347911 293 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 SNORA79B-201ENST00000410557 148 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC013268.2-201ENST00000420753 337 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 RPL12P18-201ENST00000437175 325 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC069304.1-201ENST00000491593 704 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC114324.2-202ENST00000503812 134 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 RAD21-204ENST00000518055 896 ntTSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 HSPE1P2-201ENST00000554777 306 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 MIR4311-201ENST00000580794 100 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 MIR4472-2-201ENST00000582069 67 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC006363.1-201ENST00000603806 463 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 AC019072.1-201ENST00000604535 1551 ntBASIC5.76□□□□□ -1.49
RHOXF2Q9BQY4 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 TTC39DP-201ENST00000416781 1688 ntBASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
RHOXF2Q9BQY4 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms