Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL359219.2-201ENST00000555184 348 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.05□□□□□ -1.6
SSX3Q99909 OR4H6P-201ENST00000563771 921 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.05□□□□□ -1.6
SSX3Q99909 AP005136.2-201ENST00000583253 1049 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX3Q99909 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC019131.2-201ENST00000609071 870 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 FAM27E2-201ENST00000619668 403 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AL133370.2-201ENST00000619934 439 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 NEAT1-202ENST00000501122 22743 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 TCP1P3-201ENST00000414406 1498 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX3Q99909 UGT2B26P-201ENST00000508672 1613 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AC087565.3-202ENST00000642085 1603 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 BRAFP1-201ENST00000445336 2703 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 KYNUP3-201ENST00000574386 1341 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SSX3Q99909 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX3Q99909 AL034403.1-201ENST00000399414 885 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 RPL10P10-201ENST00000403509 664 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 AC016027.5-201ENST00000427227 210 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 RPL23AP4-201ENST00000427757 463 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 PPIAP10-201ENST00000438675 458 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 KRT8P51-201ENST00000438938 274 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AL590004.3-202ENST00000445883 451 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AL035551.1-201ENST00000446931 348 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 NDUFA5P8-201ENST00000449019 346 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AC022431.1-201ENST00000450941 438 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 HIGD1AP16-201ENST00000450986 258 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.04□□□□□ -1.6
SSX3Q99909 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 IMPA1P1-201ENST00000510718 842 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 CYP4F27P-201ENST00000514557 494 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 RNU6-362P-201ENST00000516736 90 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.04□□□□□ -1.6
SSX3Q99909 AC005363.1-201ENST00000530779 351 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 HMGB1P42-201ENST00000532126 553 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 AL121579.2-201ENST00000555466 590 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 AC005726.4-201ENST00000582858 458 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.04□□□□□ -1.6
SSX3Q99909 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 GLYATL1P2-202ENST00000588046 902 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 DYNLL1P1-201ENST00000595442 269 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 COX6CP7-201ENST00000597056 208 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AP001823.1-201ENST00000604056 1003 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AC096553.1-201ENST00000605169 829 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.04□□□□□ -1.6
SSX3Q99909 AC107308.1-201ENST00000615897 301 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 AL445649.1-201ENST00000615941 691 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
SSX3Q99909 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX3Q99909 HSPD1P9-201ENST00000420325 1636 ntBASIC5.04□□□□□ -1.6
SSX3Q99909 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.04□□□□□ -1.6
SSX3Q99909 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SSX3Q99909 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SSX3Q99909 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms