Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC079315.1-201ENST00000602952 623 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL499605.1-201ENST00000604628 403 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC024589.2-201ENST00000605642 1294 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL355802.4-201ENST00000607635 548 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL139407.1-201ENST00000613826 1175 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC007786.3-201ENST00000615154 596 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC005899.7-201ENST00000618199 588 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC093648.1-201ENST00000623546 606 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC025262.3-201ENST00000623666 360 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AL591848.4-201ENST00000567832 3472 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC093225.1-201ENST00000506867 1408 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 AC022034.1-201ENST00000512867 2156 ntBASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CDK5RAP1Q96SZ6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL157831.2-201ENST00000564681 3095 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 MTND4P8-201ENST00000514997 1362 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 BIN2P1-201ENST00000504996 1530 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 COX6B1P3-201ENST00000312310 260 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 SNORA43.1-201ENST00000364863 140 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 GAPDHP15-201ENST00000398586 975 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL358178.1-201ENST00000407698 397 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 BX664727.1-201ENST00000416024 466 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 MTCO1P21-201ENST00000416634 589 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 KRR1P1-201ENST00000419430 803 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC090960.1-201ENST00000421072 306 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 NANOGP5-201ENST00000424456 877 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 MTND4LP13-201ENST00000425022 298 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 PNKDP1-201ENST00000435914 430 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 TRIM60P16-201ENST00000444048 694 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 PPIAP7-201ENST00000454070 489 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 HMGN1P8-201ENST00000463578 288 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 LSM3P4-201ENST00000502948 309 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC010468.3-201ENST00000508225 458 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 RNU5A-4P-201ENST00000516588 111 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 Y_RNA.710-201ENST00000516975 110 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AP000620.1-201ENST00000527147 504 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 ZNF321P-202ENST00000550843 495 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC009097.3-201ENST00000563557 1018 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 MIR4301-201ENST00000577203 66 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL160237.3-201ENST00000604114 1013 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL591167.1-201ENST00000607321 456 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092266.1-201ENST00000610958 165 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC069542.2-201ENST00000624816 216 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 IFIT1P1-201ENST00000400497 1449 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL359091.1-201ENST00000449048 1734 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AC011416.1-201ENST00000514947 1732 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 HSPD1P14-201ENST00000432666 1618 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 AL133243.2-201ENST00000610331 1621 ntBASIC6.47□□□□□ -1.37
CDK5RAP1Q96SZ6 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms