Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 OR8G3P-202ENST00000641572 1255 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 MAPK10-328ENST00000641553 4009 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 AC015689.2-201ENST00000528172 1738 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 RNF19BPY-201ENST00000458209 1550 ntBASIC5.76□□□□□ -1.49
C9orf72Q96LT7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
C9orf72Q96LT7 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 RN7SKP292-201ENST00000365522 317 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 RPS3AP2-201ENST00000407190 754 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 RNA5SP178-201ENST00000410380 128 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 REREP1Y-201ENST00000422655 198 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 VTI1BP4-201ENST00000427516 527 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 REREP2Y-201ENST00000439103 200 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AL161636.2-201ENST00000445179 927 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 RNU6-964P-201ENST00000516524 69 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 SEPT10P1-201ENST00000517342 1162 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC006530.1-201ENST00000555980 571 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AC016839.1-201ENST00000578162 867 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 AL139124.1-201ENST00000609123 421 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 NEPNP-201ENST00000404786 1371 ntBASIC5.75□□□□□ -1.49
C9orf72Q96LT7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C9orf72Q96LT7 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC144833.1-201ENST00000567953 4089 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC106872.5-201ENST00000508856 1416 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC004158.1-201ENST00000564508 4319 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 SEPT7P2-202ENST00000398921 823 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 MRPL53P1-201ENST00000414323 319 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 CHEK2P5-201ENST00000423877 246 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 RN7SL174P-201ENST00000475578 289 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 RN7SL273P-201ENST00000481561 299 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 RN7SL57P-201ENST00000493687 290 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC106872.4-201ENST00000510050 523 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 GAPDHP71-201ENST00000511530 1003 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC135626.1-201ENST00000556983 435 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC126175.1-201ENST00000617041 758 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AP005431.1-201ENST00000618479 319 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC241377.1-201ENST00000619797 406 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC079097.1-201ENST00000512187 1399 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 GVINP1-202ENST00000531871 7271 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C9orf72Q96LT7 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.74□□□□□ -1.49
C9orf72Q96LT7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
C9orf72Q96LT7 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms