Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AP001264.1-201ENST00000620602 703 ntBASIC5.72□□□□□ -1.49
CPEB3Q8NE35 AL138693.1-201ENST00000622219 129 ntBASIC5.72□□□□□ -1.49
CPEB3Q8NE35 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 SNX18P10-201ENST00000625014 519 ntBASIC5.72□□□□□ -1.49
CPEB3Q8NE35 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 CAP1P2-201ENST00000417455 1409 ntBASIC5.72□□□□□ -1.49
CPEB3Q8NE35 AC093536.2-201ENST00000565257 1406 ntBASIC5.72□□□□□ -1.49
CPEB3Q8NE35 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
CPEB3Q8NE35 AC022905.1-201ENST00000503430 3048 ntBASIC5.72□□□□□ -1.49
CPEB3Q8NE35 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CPEB3Q8NE35 HSPD1P11-201ENST00000508643 1702 ntBASIC5.71□□□□□ -1.49
CPEB3Q8NE35 AL161912.4-201ENST00000623889 2468 ntBASIC5.71□□□□□ -1.49
CPEB3Q8NE35 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
CPEB3Q8NE35 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.71□□□□□ -1.49
CPEB3Q8NE35 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 RNU4-92P-201ENST00000363783 136 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 Y_RNA.201-201ENST00000364052 96 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 SNORD116-12-201ENST00000384468 92 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 LYPLA1P3-201ENST00000402650 695 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 USP9YP26-201ENST00000421008 661 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 ARL4AP3-201ENST00000441452 574 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC118469.1-201ENST00000442943 488 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 MTND2P4-201ENST00000445034 1004 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 CCNJP1-201ENST00000450600 1149 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 RPS6P2-201ENST00000454208 705 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL157777.1-201ENST00000468100 304 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 EIF4E2P2-201ENST00000492033 736 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 RPS27AP16-201ENST00000492222 470 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 RPL5P14-201ENST00000494197 878 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 RPL19P11-201ENST00000495944 589 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 MTCYBP16-201ENST00000509187 1129 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 SCARNA5-201ENST00000516201 276 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AP000619.2-201ENST00000546014 969 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC007346.1-201ENST00000569208 867 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC015802.2-201ENST00000589690 189 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC114477.1-201ENST00000605097 605 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC010245.2-201ENST00000606908 1167 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC005021.1-201ENST00000608730 355 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL352984.2-202ENST00000613699 155 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL031658.2-201ENST00000616850 651 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC005899.6-201ENST00000620729 297 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 MIR6503-201ENST00000622884 86 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC007671.2-201ENST00000637344 619 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL157831.2-201ENST00000564681 3095 ntBASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CPEB3Q8NE35 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms