Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MIR4260-201ENST00000583107 67 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC010615.3-201ENST00000597319 394 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 SMIM12P1-201ENST00000603004 274 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AL591222.2-201ENST00000604443 754 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 IGKV2OR2-7-201ENST00000604652 304 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC011891.2-201ENST00000604949 397 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC073389.3-201ENST00000609434 935 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AL080312.2-201ENST00000613001 630 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC090607.5-201ENST00000615692 224 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AC089999.3-201ENST00000622440 577 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 OR11H2-202ENST00000641517 1085 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC71LQ8N9Z2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 OR56A4-201ENST00000330728 1209 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 RNA5SP326-201ENST00000363209 110 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 SNORA64.3-201ENST00000365647 134 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 RIMKLBP2-201ENST00000424737 654 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC092646.1-201ENST00000427142 901 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 HMGN2P27-201ENST00000427352 270 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 RPEP4-201ENST00000437636 602 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 NANOGP9-201ENST00000439890 892 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 COX6B1P2-201ENST00000489624 230 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC021193.1-201ENST00000511607 420 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF519P4-201ENST00000514008 125 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC079064.1-201ENST00000528365 362 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC018552.1-201ENST00000562099 811 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC073333.2-201ENST00000603589 769 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 FAM72A-208ENST00000607379 1139 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 uc_338.7-201ENST00000621834 124 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC092376.2-201ENST00000622621 4116 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 MAPK10-328ENST00000641553 4009 ntBASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.69□□□□□ -1.66
CCDC71LQ8N9Z2 STX3-208ENST00000641815 3236 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 SMG1P4-204ENST00000523028 4131 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CCDC71LQ8N9Z2 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms