Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 RN7SKP253-201ENST00000516424 309 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC136777.2-201ENST00000522979 358 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 MIR6862-1-201ENST00000613016 70 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 MIR6862-2-201ENST00000614755 70 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC000095.2-202ENST00000637415 154 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 AC015799.1-201ENST00000622996 3122 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 HSPD1P7-201ENST00000447985 1686 ntBASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
C9orf40Q8IXQ3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC027279.4-201ENST00000624371 2072 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 UGT2B24P-201ENST00000514441 1597 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC137056.2-201ENST00000624055 1958 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 RN7SKP206-201ENST00000410823 293 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 OR10T1P-201ENST00000424327 947 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 OR6D1P-201ENST00000436165 939 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 ATP5LP5-201ENST00000483050 299 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 RPS17P5-201ENST00000498293 408 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AC012616.1-201ENST00000600294 197 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AL353729.2-201ENST00000605859 1249 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 MIR4302-201ENST00000638058 60 ntBASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
C9orf40Q8IXQ3 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 RN7SKP124-201ENST00000364730 341 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 RN7SKP28-201ENST00000364770 305 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 U3.25-201ENST00000391209 220 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AL391422.1-201ENST00000402155 436 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AL009179.1-201ENST00000406085 265 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 VTI1BP4-201ENST00000427516 527 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AC012075.1-201ENST00000436549 580 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 CYCSP51-201ENST00000443545 318 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 RN7SL583P-201ENST00000475692 287 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 GAPDHP62-201ENST00000515313 990 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AP001357.1-201ENST00000586304 1053 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AL589674.2-201ENST00000604304 337 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AL118522.2-201ENST00000616045 615 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AC018628.1-201ENST00000624147 3819 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 AC092451.3-201ENST00000625067 1343 ntBASIC5.16□□□□□ -1.58
C9orf40Q8IXQ3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms