Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 HSPA8P17-201ENST00000427029 1382 ntBASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
NUP54Q7Z3B4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AL121768.1-201ENST00000613917 2544 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 RNFT1P3-201ENST00000340898 1052 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 EI24P3-201ENST00000399046 1062 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 TRIM60P13-201ENST00000432350 1283 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 RSL24D1P8-201ENST00000434442 492 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC073410.1-201ENST00000435125 589 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 VN1R110P-201ENST00000438988 971 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 BTBD7P2-201ENST00000441962 620 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 BUD31P2-201ENST00000449374 300 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 SDC4P-201ENST00000453285 601 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 CST12P-201ENST00000457644 362 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 ACA64.4-201ENST00000459070 127 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC104164.1-201ENST00000460282 590 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 RN7SL269P-201ENST00000467795 305 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC025458.1-201ENST00000506046 166 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 WBP1LP3-201ENST00000523033 208 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC090826.1-203ENST00000569235 490 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AL138895.2-201ENST00000603019 178 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC009237.12-201ENST00000604755 742 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC023813.4-201ENST00000607580 580 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 MIR6809-201ENST00000612189 116 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 MIR6793-201ENST00000612376 63 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AL133370.2-201ENST00000619934 439 ntBASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NUP54Q7Z3B4 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 RN7SKP128-201ENST00000364270 303 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 MIR7-1-201ENST00000384871 110 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL096711.1-201ENST00000404780 554 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 SNORA11.5-201ENST00000408163 128 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 GNG5P5-201ENST00000420444 220 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC021876.1-201ENST00000425959 359 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 RPL23AP4-201ENST00000427757 463 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 RPL12P18-201ENST00000437175 325 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 BX679664.2-201ENST00000439282 283 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 BMS1P10-201ENST00000443754 1120 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 RPL5P10-201ENST00000445207 894 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 GEMIN2P1-201ENST00000454246 752 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 TRBV5-2-201ENST00000489095 273 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC008629.2-201ENST00000503783 483 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 snoU109.5-201ENST00000516231 132 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC005363.1-201ENST00000530779 351 ntBASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.49□□□□□ -1.53
NUP54Q7Z3B4 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms