Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 AC092070.2-203ENST00000598377 3644 ntBASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
CCDC141Q6ZP82 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AC009779.8-201ENST00000641684 4384 ntBASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AL772161.1-201ENST00000439130 476 ntBASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 TRY2P-201ENST00000448860 689 ntBASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AL353729.2-201ENST00000605859 1249 ntBASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 AL158152.1-201ENST00000602652 1435 ntBASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 LCOR-201ENST00000286067 4542 ntBASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
CCDC141Q6ZP82 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
CCDC141Q6ZP82 AL117378.2-201ENST00000622916 1337 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC093162.1-201ENST00000419682 124 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 RHOT1P3-201ENST00000436571 331 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC092647.3-201ENST00000443044 633 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC092647.2-201ENST00000452998 253 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC002075.1-201ENST00000457396 676 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 SNORD125-201ENST00000459538 96 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC009127.1-201ENST00000467090 155 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC105233.1-201ENST00000498840 781 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AL627230.1-201ENST00000613077 211 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 AL591926.8-201ENST00000616876 211 ntBASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.12
CCDC141Q6ZP82 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AC068138.1-201ENST00000412635 217 ntBASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 RN7SL423P-201ENST00000486202 304 ntBASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 RPS4XP20-201ENST00000505751 772 ntBASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 XIST-210ENST00000602863 775 ntTSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AC009237.13-201ENST00000603193 276 ntBASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AL353796.1-201ENST00000561542 3241 ntBASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 INTS6P1-201ENST00000504674 2530 ntBASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
CCDC141Q6ZP82 U3.3-201ENST00000362986 216 ntBASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms