Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 GARSP1-201ENST00000570895 719 ntBASIC6.21□□□□□ -1.42
VSTM1Q6UX27 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 AL355974.3-201ENST00000617383 467 ntBASIC6.21□□□□□ -1.42
VSTM1Q6UX27 AC009269.6-201ENST00000621778 588 ntBASIC6.21□□□□□ -1.42
VSTM1Q6UX27 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 CASC19-260ENST00000641828 2001 ntBASIC6.21□□□□□ -1.42
VSTM1Q6UX27 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VSTM1Q6UX27 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC123769.1-201ENST00000530992 3192 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 RNU6-670P-201ENST00000364312 104 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 RN7SKP78-201ENST00000364711 318 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 RNU6-925P-201ENST00000384629 104 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL139039.2-201ENST00000407436 479 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 SDHDP6-201ENST00000414693 480 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL161636.2-201ENST00000445179 927 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 MORF4L1P4-201ENST00000450245 976 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL603882.1-201ENST00000463059 681 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 UBFD1P1-201ENST00000473259 814 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 TRBV5-2-201ENST00000489095 273 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC104109.1-201ENST00000498563 436 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 HAUS1P1-201ENST00000505275 832 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 MIR4260-201ENST00000583107 67 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 BNIP3P31-201ENST00000604515 566 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AP005431.1-201ENST00000618479 319 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AL355480.1-201ENST00000629041 99 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC063952.1-203ENST00000634410 658 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 MTND4P9-201ENST00000507819 1346 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VSTM1Q6UX27 AC130304.1-201ENST00000622942 2385 ntBASIC6.2□□□□□ -1.42
VSTM1Q6UX27 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC232271.1-201ENST00000602455 2715 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AL161756.3-201ENST00000641216 2071 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AL355488.2-201ENST00000609909 2850 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 RNA5SP178-201ENST00000410380 128 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 RN7SKP29-201ENST00000410957 272 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 MRPL53P1-201ENST00000414323 319 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 RPS12P17-201ENST00000438591 377 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC023141.8-201ENST00000442554 208 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 HMGN1P36-201ENST00000446623 298 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 C1DP3-201ENST00000455013 423 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 RN7SL273P-201ENST00000481561 299 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 PANCR-201ENST00000503456 493 ntTSL 5 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC110760.3-202ENST00000515177 371 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC023158.1-201ENST00000561632 1025 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AC012146.2-201ENST00000576545 416 ntBASIC6.19□□□□□ -1.42
VSTM1Q6UX27 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms