Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MORF4L2P1-201ENST00000503761 858 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AL121594.4-201ENST00000556211 1196 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 ZNF322P1-201ENST00000568013 1209 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC015849.6-201ENST00000605454 474 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC018645.2-201ENST00000609151 472 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC097478.2-201ENST00000610572 514 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AP003485.1-201ENST00000625093 753 ntBASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ZNF549Q6P9A3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC078880.4-201ENST00000617627 1749 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC087516.1-201ENST00000561236 2428 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AL159987.1-201ENST00000347911 293 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 MIR1203-201ENST00000408812 85 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 NIFKP3-201ENST00000417799 865 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC126120.1-201ENST00000431082 470 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 MRPS21P3-201ENST00000436696 262 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 RPSAP37-201ENST00000470913 821 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 RN7SL170P-201ENST00000487098 295 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC073610.1-201ENST00000489971 396 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC114781.3-201ENST00000512083 142 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 HMGN2P36-201ENST00000529541 409 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC024405.1-201ENST00000532521 1042 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC137627.1-201ENST00000545761 289 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC139697.1-201ENST00000548429 745 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LINC00557-201ENST00000563184 1279 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC008507.2-201ENST00000588402 1176 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 NANOGP3-201ENST00000605855 286 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AL451064.1-201ENST00000607718 471 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC015712.7-201ENST00000615211 635 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC073593.1-201ENST00000624500 411 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 OR4G3P-201ENST00000633500 913 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 AC009962.1-201ENST00000567327 3813 ntBASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ZNF549Q6P9A3 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC123769.1-201ENST00000530992 3192 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AL161912.4-201ENST00000623889 2468 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 AC027279.4-201ENST00000624371 2072 ntBASIC5.67□□□□□ -1.5
ZNF549Q6P9A3 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms