Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNA5SP339-201ENST00000390987 122 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AC009804.1-201ENST00000400949 179 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 RN7SKP273-201ENST00000411392 314 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 PRUNEP1-201ENST00000425846 705 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 MED28P3-201ENST00000444288 531 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 SUMO2P1-206ENST00000445436 284 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 SBDSP1-204ENST00000453858 737 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AC115223.1-201ENST00000466377 870 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AL512329.2-201ENST00000607350 548 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 AC021766.1-201ENST00000624404 741 ntBASIC6.71□□□□□ -1.33
RFX7Q2KHR2 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
RFX7Q2KHR2 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
RFX7Q2KHR2 AL591135.1-201ENST00000401578 5914 ntBASIC6.71□□□□□ -1.34
RFX7Q2KHR2 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RFX7Q2KHR2 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RFX7Q2KHR2 AL592429.1-201ENST00000403909 1473 ntBASIC6.71□□□□□ -1.34
RFX7Q2KHR2 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 RN7SKP145-201ENST00000363291 303 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 SPTLC1P2-201ENST00000407089 121 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AP000534.2-201ENST00000412729 568 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 NANOGP4-201ENST00000427230 913 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 IGBP1P3-201ENST00000447449 1000 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 RPEP1-201ENST00000504507 658 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AC000068.2-201ENST00000608816 460 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AC004948.1-201ENST00000609858 672 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 EIF3EP2-201ENST00000423042 1814 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AC018809.2-201ENST00000602436 3823 ntBASIC6.7□□□□□ -1.34
RFX7Q2KHR2 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.7□□□□□ -1.34
RFX7Q2KHR2 RNA5SP335-201ENST00000363817 110 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AL009179.1-201ENST00000406085 265 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 RNU4-34P-201ENST00000410431 124 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 RPSAP35-201ENST00000413753 818 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 NPM1P22-201ENST00000427761 952 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 HIGD1AP14-201ENST00000507617 282 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC211433.2-201ENST00000608433 387 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AL356608.1-201ENST00000610034 820 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 MIR6798-201ENST00000612887 67 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC132068.1-201ENST00000623805 459 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 SAMMSON-227ENST00000642114 1199 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 CCAT2-201ENST00000630920 1752 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 MIR133B-201ENST00000362210 119 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 SNORD56.6-201ENST00000384569 71 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC023271.1-201ENST00000445936 1090 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC093270.2-201ENST00000486157 792 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC091912.1-201ENST00000511351 248 ntBASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RFX7Q2KHR2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms