Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 AC003985.2-201ENST00000562268 1669 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EFNB3Q15768 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC024587.1-201ENST00000505925 2157 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC007842.1-201ENST00000597336 2039 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 RNFT1P3-201ENST00000340898 1052 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 RNA5SP273-201ENST00000362484 113 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
EFNB3Q15768 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 RPS29P14-201ENST00000431518 171 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 ACA64.1-201ENST00000459171 127 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 RPSAP39-201ENST00000467439 883 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 RN7SL205P-201ENST00000490174 284 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AC083795.1-201ENST00000491760 320 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AC021087.2-201ENST00000504656 1203 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 UGT2A3P7-201ENST00000510485 734 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 RFPL4AP3-201ENST00000515267 345 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 Y_RNA.667-201ENST00000516212 107 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC020916.2-201ENST00000591242 360 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC090912.3-201ENST00000609775 533 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 MIR6809-201ENST00000612189 116 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EFNB3Q15768 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EFNB3Q15768 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 AC007159.1-201ENST00000566529 4706 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AL359715.3-201ENST00000569267 2123 ntBASIC5.18□□□□□ -1.58
EFNB3Q15768 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.18□□□□□ -1.58
EFNB3Q15768 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
EFNB3Q15768 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
EFNB3Q15768 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
EFNB3Q15768 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC5.17□□□□□ -1.58
EFNB3Q15768 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.17□□□□□ -1.58
EFNB3Q15768 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.17□□□□□ -1.58
EFNB3Q15768 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
EFNB3Q15768 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.17□□□□□ -1.58
EFNB3Q15768 RNU6-1257P-201ENST00000384625 110 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
EFNB3Q15768 AL360271.1-201ENST00000395679 510 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 AL096711.1-201ENST00000404780 554 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 TMA16P2-201ENST00000413187 601 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 BTF3P9-201ENST00000418784 283 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.17□□□□□ -1.58
EFNB3Q15768 BX284632.2-201ENST00000421091 399 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.17□□□□□ -1.58
EFNB3Q15768 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.17□□□□□ -1.58
EFNB3Q15768 MGAT2P2-201ENST00000427194 797 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 DSTNP5-201ENST00000427921 523 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 FTLP19-201ENST00000433300 394 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.17□□□□□ -1.58
EFNB3Q15768 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.17□□□□□ -1.58
EFNB3Q15768 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.17□□□□□ -1.58
EFNB3Q15768 AL512605.1-202ENST00000441919 381 ntBASIC5.17□□□□□ -1.58
EFNB3Q15768 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.17□□□□□ -1.58
EFNB3Q15768 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.17□□□□□ -1.58
EFNB3Q15768 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms