Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.65□□□□□ -1.5
RPS3AP61247 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 RNA5SP279-201ENST00000365513 117 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RPS3AP61247 RN7SKP151-201ENST00000410230 316 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.65□□□□□ -1.5
RPS3AP61247 GNG5P5-201ENST00000420444 220 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.65□□□□□ -1.5
RPS3AP61247 RPL23AP4-201ENST00000427757 463 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 NPM1P18-201ENST00000434232 732 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 RPSAP40-201ENST00000442343 891 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 RPL5P7-201ENST00000444235 813 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.65□□□□□ -1.5
RPS3AP61247 RPL7L1P3-201ENST00000455249 689 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 CYCSP53-201ENST00000455540 265 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.65□□□□□ -1.5
RPS3AP61247 AC008945.1-201ENST00000505144 499 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 SNX18P24-201ENST00000505249 671 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC091874.2-201ENST00000505889 720 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC018797.1-201ENST00000510791 255 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 RNA5SP400-201ENST00000517155 111 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC103833.1-201ENST00000517442 172 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.65□□□□□ -1.5
RPS3AP61247 AC011853.1-201ENST00000518911 454 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 AP003049.1-201ENST00000529418 457 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.65□□□□□ -1.5
RPS3AP61247 AC026826.3-201ENST00000561747 158 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
RPS3AP61247 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 MIR4502-201ENST00000580432 81 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 AC027334.1-201ENST00000603257 310 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 AC135178.6-201ENST00000605314 398 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.65□□□□□ -1.5
RPS3AP61247 AL512506.1-201ENST00000613918 449 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
RPS3AP61247 AL357140.4-201ENST00000636827 412 ntBASIC5.65□□□□□ -1.5
RPS3AP61247 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.65□□□□□ -1.5
RPS3AP61247 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RPS3AP61247 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RPS3AP61247 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
RPS3AP61247 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.51
RPS3AP61247 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RPS3AP61247 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RPS3AP61247 AL121950.1-201ENST00000624993 2077 ntBASIC5.65□□□□□ -1.51
RPS3AP61247 AC007342.5-201ENST00000571340 2142 ntBASIC5.65□□□□□ -1.51
RPS3AP61247 AC114774.1-201ENST00000507410 1770 ntBASIC5.65□□□□□ -1.51
RPS3AP61247 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
RPS3AP61247 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
RPS3AP61247 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
RPS3AP61247 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.64□□□□□ -1.51
RPS3AP61247 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
RPS3AP61247 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
RPS3AP61247 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
RPS3AP61247 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RPS3AP61247 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.64□□□□□ -1.51
RPS3AP61247 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RPS3AP61247 AL157702.1-201ENST00000398764 426 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.64□□□□□ -1.51
RPS3AP61247 BX119321.1-201ENST00000428912 797 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 GAPDHP59-201ENST00000435908 267 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.64□□□□□ -1.51
RPS3AP61247 MED28P3-201ENST00000444288 531 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 AC010240.2-201ENST00000445363 1205 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 RANP2-201ENST00000456833 229 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.64□□□□□ -1.51
RPS3AP61247 AC092691.2-201ENST00000461787 803 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 RPL12P30-201ENST00000488389 499 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 ASNSP4-201ENST00000511103 447 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.64□□□□□ -1.51
RPS3AP61247 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.64□□□□□ -1.51
RPS3AP61247 RNA5SP206-201ENST00000516703 121 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.64□□□□□ -1.51
RPS3AP61247 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
RPS3AP61247 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.64□□□□□ -1.51
RPS3AP61247 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.64□□□□□ -1.51
RPS3AP61247 AC084121.1-201ENST00000533882 835 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.64□□□□□ -1.51
RPS3AP61247 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.64□□□□□ -1.51
RPS3AP61247 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.64□□□□□ -1.51
RPS3AP61247 AL845552.1-201ENST00000556820 323 ntBASIC5.64□□□□□ -1.51
RPS3AP61247 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 328.1 ms