Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN12P56749 PCNAP4-201ENST00000532690 730 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC4.78□□□□□ -1.64
CLDN12P56749 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.78□□□□□ -1.64
CLDN12P56749 LSM3P2-201ENST00000551246 273 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN12P56749 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN12P56749 MIR4311-201ENST00000580794 100 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 MIR4260-201ENST00000583107 67 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN12P56749 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 AC022919.1-201ENST00000624979 626 ntBASIC4.78□□□□□ -1.64
CLDN12P56749 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN12P56749 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
CLDN12P56749 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN12P56749 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN12P56749 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN12P56749 AC097461.1-201ENST00000568928 2821 ntBASIC4.78□□□□□ -1.65
CLDN12P56749 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 Z95331.1-201ENST00000623075 23112 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 TCP1P3-201ENST00000414406 1498 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CLDN12P56749 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 RNA5SP500-201ENST00000364486 119 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 RNA5SP279-201ENST00000365513 117 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 OR1L6-202ENST00000373684 1044 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 GCNT1P4-201ENST00000404096 329 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 AL009179.1-201ENST00000406085 265 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 RPL7AP49-201ENST00000429522 581 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 AL591438.1-201ENST00000433508 581 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 RPL12P49-201ENST00000441100 121 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC245028.2-201ENST00000458673 253 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 RN7SL583P-201ENST00000475692 287 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC106822.1-201ENST00000502647 526 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 AC112484.3-201ENST00000505910 329 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 IGKV3D-25-201ENST00000519599 235 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 MT1CP-201ENST00000567054 174 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 AC108673.3-201ENST00000609183 335 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 AC091932.2-201ENST00000623014 291 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 MT-RNR2-201ENST00000387347 1559 ntBASIC4.77□□□□□ -1.65
CLDN12P56749 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN12P56749 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN12P56749 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN12P56749 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN12P56749 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN12P56749 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
CLDN12P56749 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN12P56749 HSPD1P9-201ENST00000420325 1636 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN12P56749 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN12P56749 RNA5SP30-201ENST00000365552 115 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 AC007618.1-201ENST00000366455 732 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CLDN12P56749 NENFP1-201ENST00000419476 466 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN12P56749 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLDN12P56749 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC4.76□□□□□ -1.65
CLDN12P56749 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CLDN12P56749 RPL19P16-201ENST00000433839 588 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN12P56749 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN12P56749 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CLDN12P56749 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN12P56749 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN12P56749 AC090804.1-201ENST00000448870 490 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 AC069304.1-201ENST00000491593 704 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 RN7SL362P-201ENST00000494228 267 ntBASIC4.76□□□□□ -1.65
CLDN12P56749 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN12P56749 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.76□□□□□ -1.65
CLDN12P56749 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.76□□□□□ -1.65
CLDN12P56749 CDC42P3-201ENST00000518493 633 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms