Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC005532.2-201ENST00000467154 373 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC004453.1-201ENST00000487895 408 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMK1P53667 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 OR5D15P-201ENST00000531671 942 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.9□□□□□ -1.46
LIMK1P53667 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 AL049872.1-201ENST00000556323 322 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.9□□□□□ -1.46
LIMK1P53667 FKBP1AP1-201ENST00000594588 318 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC093388.1-201ENST00000609166 430 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 AL391597.1-201ENST00000618707 694 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RNU6-368P-201ENST00000620928 107 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RNU6-538P-201ENST00000622329 107 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 AL606537.1-201ENST00000607258 2011 ntBASIC5.9□□□□□ -1.47
LIMK1P53667 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.9□□□□□ -1.47
LIMK1P53667 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.9□□□□□ -1.47
LIMK1P53667 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIMK1P53667 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
LIMK1P53667 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIMK1P53667 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIMK1P53667 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
LIMK1P53667 CASC19-248ENST00000641674 1356 ntBASIC5.9□□□□□ -1.47
LIMK1P53667 AC006213.6-201ENST00000623722 4179 ntBASIC5.9□□□□□ -1.47
LIMK1P53667 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
LIMK1P53667 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
LIMK1P53667 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.89□□□□□ -1.47
LIMK1P53667 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 AC016583.1-201ENST00000624221 2431 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.89□□□□□ -1.47
LIMK1P53667 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
LIMK1P53667 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 AC093849.1-201ENST00000563631 2209 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 RNA5SP350-201ENST00000363298 111 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 RN7SKP103-201ENST00000363848 320 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 GNG5P2-201ENST00000372054 207 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.89□□□□□ -1.47
LIMK1P53667 AL096829.1-201ENST00000413677 457 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 RPL12P43-201ENST00000420608 499 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 SETP10-201ENST00000424368 814 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.89□□□□□ -1.47
LIMK1P53667 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.89□□□□□ -1.47
LIMK1P53667 RPL12P3-201ENST00000440080 396 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 CNOT7P2-201ENST00000441051 832 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 EEF1B2P5-201ENST00000444820 548 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 GAPDHP23-201ENST00000444823 993 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 HMGN1P8-201ENST00000463578 288 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 FTH1P2-201ENST00000466086 412 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.89□□□□□ -1.47
LIMK1P53667 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.89□□□□□ -1.47
LIMK1P53667 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.89□□□□□ -1.47
LIMK1P53667 AL512329.2-201ENST00000607350 548 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 MIR6820-201ENST00000611508 62 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 AC087565.3-203ENST00000641018 837 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.89□□□□□ -1.47
LIMK1P53667 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
LIMK1P53667 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.89□□□□□ -1.47
LIMK1P53667 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.88□□□□□ -1.47
LIMK1P53667 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.88□□□□□ -1.47
LIMK1P53667 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.88□□□□□ -1.47
LIMK1P53667 MIR223-201ENST00000385204 110 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 MIR550A3-201ENST00000390735 95 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 RPL23AP17-201ENST00000401064 499 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 AL139148.1-201ENST00000427122 680 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.88□□□□□ -1.47
LIMK1P53667 EEF1B2P6-201ENST00000445713 673 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.88□□□□□ -1.47
LIMK1P53667 AC016027.4-201ENST00000450866 277 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.88□□□□□ -1.47
LIMK1P53667 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 MTND3P6-201ENST00000485242 339 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 AC093815.1-201ENST00000508637 280 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.88□□□□□ -1.47
LIMK1P53667 SNORA43.3-201ENST00000517240 103 ntBASIC5.88□□□□□ -1.47
LIMK1P53667 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.88□□□□□ -1.47
LIMK1P53667 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
LIMK1P53667 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.88□□□□□ -1.47
LIMK1P53667 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms