Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 AL356317.1-201ENST00000396110 1436 ntBASIC6.26□□□□□ -1.41
COPAP53621 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 GUCY1B2-204ENST00000531898 1979 ntBASIC6.26□□□□□ -1.41
COPAP53621 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COPAP53621 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 AC023490.2-201ENST00000359859 470 ntBASIC6.26□□□□□ -1.41
COPAP53621 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 RNA5SP273-201ENST00000362484 113 ntBASIC6.26□□□□□ -1.41
COPAP53621 RNU6-1251P-201ENST00000364502 107 ntBASIC6.26□□□□□ -1.41
COPAP53621 GNG5P2-201ENST00000372054 207 ntBASIC6.26□□□□□ -1.41
COPAP53621 MARK2P12-201ENST00000420129 585 ntBASIC6.26□□□□□ -1.41
COPAP53621 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.26□□□□□ -1.41
COPAP53621 AC007563.3-201ENST00000433233 371 ntBASIC6.26□□□□□ -1.41
COPAP53621 AL138787.1-202ENST00000437804 898 ntBASIC6.26□□□□□ -1.41
COPAP53621 AL390879.1-201ENST00000439143 386 ntBASIC6.26□□□□□ -1.41
COPAP53621 REG1CP-206ENST00000447469 496 ntBASIC6.26□□□□□ -1.41
COPAP53621 CCRL1P1-201ENST00000449542 1053 ntBASIC6.26□□□□□ -1.41
COPAP53621 SETP20-201ENST00000457046 852 ntBASIC6.26□□□□□ -1.41
COPAP53621 AL022319.1-201ENST00000458183 1167 ntBASIC6.26□□□□□ -1.41
COPAP53621 RPL7P51-201ENST00000490532 749 ntBASIC6.26□□□□□ -1.41
COPAP53621 MTCO2P9-201ENST00000503214 694 ntBASIC6.26□□□□□ -1.41
COPAP53621 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.26□□□□□ -1.41
COPAP53621 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.26□□□□□ -1.41
COPAP53621 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
COPAP53621 AC093770.1-201ENST00000511559 571 ntBASIC6.26□□□□□ -1.41
COPAP53621 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.26□□□□□ -1.41
COPAP53621 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.26□□□□□ -1.41
COPAP53621 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.26□□□□□ -1.41
COPAP53621 DUX4L52-201ENST00000549363 777 ntBASIC6.26□□□□□ -1.41
COPAP53621 AC068305.2-201ENST00000550567 1205 ntBASIC6.26□□□□□ -1.41
COPAP53621 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.26□□□□□ -1.41
COPAP53621 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 AC233266.2-201ENST00000567067 528 ntBASIC6.26□□□□□ -1.41
COPAP53621 AC090651.1-201ENST00000567865 634 ntBASIC6.26□□□□□ -1.41
COPAP53621 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC6.26□□□□□ -1.41
COPAP53621 AC008521.2-201ENST00000591021 259 ntBASIC6.26□□□□□ -1.41
COPAP53621 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC6.26□□□□□ -1.41
COPAP53621 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 AL592494.3-201ENST00000609485 464 ntBASIC6.26□□□□□ -1.41
COPAP53621 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 AC015722.2-201ENST00000622210 551 ntBASIC6.26□□□□□ -1.41
COPAP53621 AC097460.3-201ENST00000623099 442 ntBASIC6.26□□□□□ -1.41
COPAP53621 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.26□□□□□ -1.41
COPAP53621 OR5AC4P-202ENST00000642086 985 ntBASIC6.26□□□□□ -1.41
COPAP53621 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 AC091305.2-201ENST00000624049 1576 ntBASIC6.26□□□□□ -1.41
COPAP53621 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.26□□□□□ -1.41
COPAP53621 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COPAP53621 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.25□□□□□ -1.41
COPAP53621 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 AOX3P-204ENST00000491025 2107 ntBASIC6.25□□□□□ -1.41
COPAP53621 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.25□□□□□ -1.41
COPAP53621 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 RNFT1P3-201ENST00000340898 1052 ntBASIC6.25□□□□□ -1.41
COPAP53621 RNU6-729P-201ENST00000384399 107 ntBASIC6.25□□□□□ -1.41
COPAP53621 AL121835.1-201ENST00000404250 354 ntBASIC6.25□□□□□ -1.41
COPAP53621 UQCRFS1P3-201ENST00000407697 385 ntBASIC6.25□□□□□ -1.41
COPAP53621 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COPAP53621 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.25□□□□□ -1.41
COPAP53621 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 UBE2D3P3-201ENST00000426992 425 ntBASIC6.25□□□□□ -1.41
COPAP53621 AC104843.2-201ENST00000427666 297 ntBASIC6.25□□□□□ -1.41
COPAP53621 PTP4A1P3-201ENST00000433661 420 ntBASIC6.25□□□□□ -1.41
COPAP53621 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC6.25□□□□□ -1.41
COPAP53621 AC245517.2-201ENST00000442890 346 ntBASIC6.25□□□□□ -1.41
COPAP53621 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.25□□□□□ -1.41
COPAP53621 AL157884.3-201ENST00000448273 1184 ntBASIC6.25□□□□□ -1.41
COPAP53621 PPIAP20-201ENST00000449839 135 ntBASIC6.25□□□□□ -1.41
COPAP53621 CFL1P4-201ENST00000451536 498 ntBASIC6.25□□□□□ -1.41
COPAP53621 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.25□□□□□ -1.41
COPAP53621 RANP2-201ENST00000456833 229 ntBASIC6.25□□□□□ -1.41
COPAP53621 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms