Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.2□□□□□ -1.42
CLCN3P51790 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLCN3P51790 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CLCN3P51790 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLCN3P51790 AC235565.1-201ENST00000456962 1325 ntBASIC6.2□□□□□ -1.42
CLCN3P51790 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CLCN3P51790 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CLCN3P51790 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN3P51790 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 GAPDHP24-201ENST00000328713 983 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN3P51790 RNU4-2-201ENST00000365668 141 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 AC083799.1-201ENST00000366451 910 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.19□□□□□ -1.42
CLCN3P51790 SNORA11B-201ENST00000408175 129 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC6.19□□□□□ -1.42
CLCN3P51790 RPL23AP18-201ENST00000416139 468 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN3P51790 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN3P51790 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.19□□□□□ -1.42
CLCN3P51790 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.19□□□□□ -1.42
CLCN3P51790 RN7SL51P-201ENST00000468230 285 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 COPS8P2-201ENST00000473228 627 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 RN7SL583P-201ENST00000475692 287 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.19□□□□□ -1.42
CLCN3P51790 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.19□□□□□ -1.42
CLCN3P51790 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN3P51790 MIR1269B-201ENST00000580405 75 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 MIR4311-201ENST00000580794 100 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.19□□□□□ -1.42
CLCN3P51790 SDR42E1P1-201ENST00000611327 477 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 AC021766.1-201ENST00000624404 741 ntBASIC6.19□□□□□ -1.42
CLCN3P51790 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.19□□□□□ -1.42
CLCN3P51790 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CLCN3P51790 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CLCN3P51790 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 AMELX-201ENST00000348912 737 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 AC009804.1-201ENST00000400949 179 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.18□□□□□ -1.42
CLCN3P51790 LDHAP2-201ENST00000437325 985 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.18□□□□□ -1.42
CLCN3P51790 AL390879.1-201ENST00000439143 386 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 XKRYP6-201ENST00000440468 1116 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 XKRYP3-201ENST00000442113 1116 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.18□□□□□ -1.42
CLCN3P51790 RPL5P12-201ENST00000477071 851 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 RNA5SP34-201ENST00000516887 130 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 AP001804.1-201ENST00000526868 919 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.18□□□□□ -1.42
CLCN3P51790 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.18□□□□□ -1.42
CLCN3P51790 DHFRP1-201ENST00000579682 559 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.18□□□□□ -1.42
CLCN3P51790 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 OR7E18P-201ENST00000592589 702 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 AC013244.1-201ENST00000604279 193 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 MIR6719-201ENST00000622428 87 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CLCN3P51790 AC068769.1-201ENST00000474767 2426 ntBASIC6.18□□□□□ -1.42
CLCN3P51790 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CLCN3P51790 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
CLCN3P51790 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CLCN3P51790 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 AC087516.1-201ENST00000561236 2428 ntBASIC6.17□□□□□ -1.42
CLCN3P51790 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CLCN3P51790 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CLCN3P51790 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CLCN3P51790 Y_RNA.62-201ENST00000362840 99 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms