Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 OR51C1P-201ENST00000608504 942 ntBASIC5.48□□□□□ -1.53
RORAP35398 MAPK10-350ENST00000641777 965 ntBASIC5.48□□□□□ -1.53
RORAP35398 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
RORAP35398 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
RORAP35398 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 LINC02019-201ENST00000608605 2060 ntBASIC5.47□□□□□ -1.53
RORAP35398 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 TCP11X1-202ENST00000622971 1372 ntBASIC5.47□□□□□ -1.53
RORAP35398 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 RNU6-673P-201ENST00000365084 104 ntBASIC5.47□□□□□ -1.53
RORAP35398 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RORAP35398 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.47□□□□□ -1.53
RORAP35398 AL391361.1-201ENST00000405580 489 ntBASIC5.47□□□□□ -1.53
RORAP35398 PRUNEP1-201ENST00000425846 705 ntBASIC5.47□□□□□ -1.53
RORAP35398 AC096775.1-201ENST00000437724 448 ntBASIC5.47□□□□□ -1.53
RORAP35398 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 AC015983.1-201ENST00000441577 373 ntBASIC5.47□□□□□ -1.53
RORAP35398 AC005297.1-201ENST00000444765 862 ntBASIC5.47□□□□□ -1.53
RORAP35398 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.47□□□□□ -1.53
RORAP35398 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 SEPT7P3-201ENST00000455017 621 ntBASIC5.47□□□□□ -1.53
RORAP35398 OSTCP1-201ENST00000455507 450 ntBASIC5.47□□□□□ -1.53
RORAP35398 RPS3AP15-201ENST00000483874 781 ntBASIC5.47□□□□□ -1.53
RORAP35398 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 AC109481.1-201ENST00000509173 282 ntBASIC5.47□□□□□ -1.53
RORAP35398 MIR2117-201ENST00000516780 80 ntBASIC5.47□□□□□ -1.53
RORAP35398 AC139365.2-201ENST00000517972 253 ntBASIC5.47□□□□□ -1.53
RORAP35398 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 AC126615.2-201ENST00000553003 515 ntBASIC5.47□□□□□ -1.53
RORAP35398 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.47□□□□□ -1.53
RORAP35398 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.47□□□□□ -1.53
RORAP35398 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.47□□□□□ -1.53
RORAP35398 AP005435.3-201ENST00000531260 3198 ntBASIC5.47□□□□□ -1.53
RORAP35398 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
RORAP35398 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
RORAP35398 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RORAP35398 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RORAP35398 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
RORAP35398 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
RORAP35398 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.46□□□□□ -1.53
RORAP35398 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.46□□□□□ -1.53
RORAP35398 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
RORAP35398 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.53
RORAP35398 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.53
RORAP35398 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.46□□□□□ -1.53
RORAP35398 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.46□□□□□ -1.54
RORAP35398 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.46□□□□□ -1.54
RORAP35398 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
RORAP35398 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RORAP35398 AL159987.1-201ENST00000347911 293 ntBASIC5.46□□□□□ -1.54
RORAP35398 RN7SKP160-201ENST00000363804 340 ntBASIC5.46□□□□□ -1.54
RORAP35398 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.46□□□□□ -1.54
RORAP35398 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.46□□□□□ -1.54
RORAP35398 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.46□□□□□ -1.54
RORAP35398 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
RORAP35398 GAPDHP48-201ENST00000436626 961 ntBASIC5.46□□□□□ -1.54
RORAP35398 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.46□□□□□ -1.54
RORAP35398 RN7SL72P-201ENST00000460697 269 ntBASIC5.46□□□□□ -1.54
RORAP35398 RPL32P33-201ENST00000487023 394 ntBASIC5.46□□□□□ -1.54
RORAP35398 AC074255.1-201ENST00000511259 501 ntBASIC5.46□□□□□ -1.54
RORAP35398 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.46□□□□□ -1.54
RORAP35398 AC021678.3-201ENST00000517893 476 ntBASIC5.46□□□□□ -1.54
RORAP35398 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms